Information for 6-GGGYGCSCCCGRGGGG (Motif 5)

A C T G T C A G A T C G A G C T C A T G A G T C A T G C G T A C A G T C A G T C C A T G T C A G A C T G C A T G C T A G C T A G
Reverse Opposite:
A G T C G A T C G T A C A G T C A G T C G T A C A C T G C T A G A C T G A T C G A C T G G T A C C T A G A T G C A G T C G T A C
p-value:1e-16
log p-value:-3.890e+01
Information Content per bp:1.755
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif12.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.8 +/- 21.6bp
Average Position of motif in Background47.5 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GGGYGCSCCCGRGGGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C T G T C A G A T C G A G C T C A T G A G T C A T G C G T A C A G T C A G T C C A T G T C A G A C T G C A T G C T A G C T A G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0103.1_Zic3_1/Jaspar

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GGGYGCSCCCGRGGGG--
---CCCCCCCGGGGGGGT
 A C T G T C A G A T C G A G C T C A T G A G T C A T G C G T A C A G T C A G T C C A T G T C A G A C T G C A T G C T A G C T A G A C G T A C G T
A C G T A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0101.1_Zic1_1/Jaspar

Match Rank:3
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GGGYGCSCCCGRGGGG-
---CACCCCCGGGGGGG
 A C T G T C A G A T C G A G C T C A T G A G T C A T G C G T A C A G T C A G T C C A T G T C A G A C T G C A T G C T A G C T A G A C G T
A C G T A C G T A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

PB0102.1_Zic2_1/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GGGYGCSCCCGRGGGG--
---CCCCCCCGGGGGGGT
 A C T G T C A G A T C G A G C T C A T G A G T C A T G C G T A C A G T C A G T C C A T G T C A G A C T G C A T G C T A G C T A G A C G T A C G T
A C G T A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGGYGCSCCCGRGGGG---
TAGCGCCCCCTGGTGGCCA
 A C T G T C A G A T C G A G C T C A T G A G T C A T G C G T A C A G T C A G T C C A T G T C A G A C T G C A T G C T A G C T A G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGGYGCSCCCGRGGGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C T G T C A G A T C G A G C T C A T G A G T C A T G C G T A C A G T C A G T C C A T G T C A G A C T G C A T G C T A G C T A G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GGGYGCSCCCGRGGGG
NNNGGGGCGCCCCCNN----
 A C G T A C G T A C G T A C G T A C T G T C A G A T C G A G C T C A T G A G T C A T G C G T A C A G T C A G T C C A T G T C A G A C T G C A T G C T A G C T A G
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGGYGCSCCCGRGGGG
-GGGGCCCAAGGGGG-
 A C T G T C A G A T C G A G C T C A T G A G T C A T G C G T A C A G T C A G T C C A T G T C A G A C T G C A T G C T A G C T A G
A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GGGYGCSCCCGRGGGG
----GTCCCCAGGGGA
 A C T G T C A G A T C G A G C T C A T G A G T C A T G C G T A C A G T C A G T C C A T G T C A G A C T G C A T G C T A G C T A G
A C G T A C G T A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGGYGCSCCCGRGGGG
---TGCCCTGAGGGCA
 A C T G T C A G A T C G A G C T C A T G A G T C A T G C G T A C A G T C A G T C C A T G T C A G A C T G C A T G C T A G C T A G
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A