Information for 4-AGGGCTGTACCCC (Motif 8)

C G T A A C T G A C T G A C T G A G T C A C G T A C T G A C G T C T G A A T G C A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A T C G A G C T C G T A G T A C C G T A A C T G A G T C A G T C A G T C A C G T
p-value:1e-9
log p-value:-2.210e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 26.3bp
Average Position of motif in Background72.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Spz1/MA0111.1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AGGGCTGTACCCC-
---GCTGTTACCCT
 C G T A A C T G A C T G A C T G A G T C A C G T A C T G A C G T C T G A A T G C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGGGCTGTACCCC
-GGGGATTCCCCC
 C G T A A C T G A C T G A C T G A G T C A C G T A C T G A C G T C T G A A T G C A G T C A G T C A G T C
A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGGGCTGTACCCC
AGGTCTCTAACC-
 C G T A A C T G A C T G A C T G A G T C A C G T A C T G A C G T C T G A A T G C A G T C A G T C A G T C
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGGGCTGTACCCC-----
-NNNNGGTACCCCCCANN
 C G T A A C T G A C T G A C T G A G T C A C G T A C T G A C G T C T G A A T G C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGGGCTGTACCCC
NAGGTCANTGACCT
 A C G T C G T A A C T G A C T G A C T G A G T C A C G T A C T G A C G T C T G A A T G C A G T C A G T C A G T C
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGGGCTGTACCCC
-GGGCGGGACC--
 C G T A A C T G A C T G A C T G A G T C A C G T A C T G A C G T C T G A A T G C A G T C A G T C A G T C
A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGGGCTGTACCCC
AGGGGATTCCCCT
 C G T A A C T G A C T G A C T G A G T C A C G T A C T G A C G T C T G A A T G C A G T C A G T C A G T C
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

Hnf4a/MA0114.3/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCTGTACCCC-
ATTGGACTTTGACCCC
 A C G T A C G T C G T A A C T G A C T G A C T G A G T C A C G T A C T G A C G T C T G A A T G C A G T C A G T C A G T C A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCTGTACCCC
CNAGGCCT-------
 A C G T A C G T C G T A A C T G A C T G A C T G A G T C A C G T A C T G A C G T C T G A A T G C A G T C A G T C A G T C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGGGCTGTACCCC
--NGCTN------
 C G T A A C T G A C T G A C T G A G T C A C G T A C T G A C G T C T G A A T G C A G T C A G T C A G T C
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T