Information for 19-GCGWGATWGC (Motif 39)

A C T G G T A C T A C G C G T A A T C G C T G A A G C T C G A T A T C G A G T C
Reverse Opposite:
A C T G A T G C C G T A C T G A G A C T A T G C G C A T A T G C C A T G A G T C
p-value:1e-3
log p-value:-7.394e+00
Information Content per bp:1.661
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.2 +/- 30.6bp
Average Position of motif in Background61.6 +/- 11.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCGWGATWGC
TGCGTG-----
 A C G T A C T G G T A C T A C G C G T A A T C G C T G A A G C T C G A T A T C G A G T C
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCGWGATWGC----
--GGGATTGCATNN
 A C T G G T A C T A C G C G T A A T C G C T G A A G C T C G A T A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

TEAD3/MA0808.1/Jaspar

Match Rank:3
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GCGWGATWGC-
---ACATTCCA
 A C T G G T A C T A C G C G T A A T C G C T G A A G C T C G A T A T C G A G T C A C G T
A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:4
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GCGWGATWGC---
---RCATTCCWGG
 A C T G G T A C T A C G C G T A A T C G C T G A A G C T C G A T A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GCGWGATWGC
GGCGGGAARN-
 A C G T A C T G G T A C T A C G C G T A A T C G C T G A A G C T C G A T A T C G A G T C
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCGWGATWGC-
TGAGTGACAGSC
 A C G T A C T G G T A C T A C G C G T A A T C G C T G A A G C T C G A T A T C G A G T C A C G T
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:7
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----GCGWGATWGC
GTCATGCHTGRCTGS
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C T A C G C G T A A T C G C T G A A G C T C G A T A T C G A G T C
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GCGWGATWGC
TTGCGTGCVA--
 A C G T A C G T A C T G G T A C T A C G C G T A A T C G C T G A A G C T C G A T A T C G A G T C
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GCGWGATWGC----
NNGCGTGTGTGCNGCN
 A C G T A C G T A C T G G T A C T A C G C G T A A T C G C T G A A G C T C G A T A T C G A G T C A C G T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----GCGWGATWGC
AGGTGNCAGACAG-
 A C G T A C G T A C G T A C G T A C T G G T A C T A C G C G T A A T C G C T G A A G C T C G A T A T C G A G T C
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T