Information for 2-GCAYCTCGVT (Motif 19)

A T C G A G T C C G T A A G T C A T G C A G C T A G T C C T A G T A G C G C A T
Reverse Opposite:
C G T A A T C G G A T C A C T G C T G A A T C G T C A G C G A T A C T G A T G C
p-value:1e-8
log p-value:-1.850e+01
Information Content per bp:1.695
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif4.03%
Number of Background Sequences with motif283.7
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets60.3 +/- 24.1bp
Average Position of motif in Background49.5 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCAYCTCGVT
GCACGTNC--
A T C G A G T C C G T A A G T C A T G C A G C T A G T C C T A G T A G C G C A T
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCAYCTCGVT
GCACGTACCC
A T C G A G T C C G T A A G T C A T G C A G C T A G T C C T A G T A G C G C A T
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

CREB3/MA0638.1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCAYCTCGVT-
GTGCCACGTCATCA
A C G T A C G T A C G T A T C G A G T C C G T A A G T C A T G C A G C T A G T C C T A G T A G C G C A T A C G T
T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCAYCTCGVT
NNVCAGCTGB--
A C G T A C G T A T C G A G T C C G T A A G T C A T G C A G C T A G T C C T A G T A G C G C A T
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCAYCTCGVT
GCACGTAY--
A T C G A G T C C G T A A G T C A T G C A G C T A G T C C T A G T A G C G C A T
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCAYCTCGVT
BGCACGTA---
A C G T A T C G A G T C C G T A A G T C A T G C A G C T A G T C C T A G T A G C G C A T
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T

XBP1/MA0844.1/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GCAYCTCGVT
AATGCCACGTCATC
A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C A T G C A G C T A G T C C T A G T A G C G C A T
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C

CREB3L1/MA0839.1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCAYCTCGVT-
ATGCCACGTCATCA
A C G T A C G T A C G T A T C G A G T C C G T A A G T C A T G C A G C T A G T C C T A G T A G C G C A T A C G T
T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GCAYCTCGVT--
GAGCCCTTGTCCCTAA
A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C A T G C A G C T A G T C C T A G T A G C G C A T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCAYCTCGVT---
AGTATTCTCGGTTGC
A C G T A C G T A T C G A G T C C G T A A G T C A T G C A G C T A G T C C T A G T A G C G C A T A C G T A C G T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C