Information for 10-TTGACCTGTCCTCYCT (Motif 12)

A G C T A C G T A C T G G T C A A G T C G T A C A C G T A T C G A C G T G T A C A T G C G C A T A G T C G A T C A G T C C G A T
Reverse Opposite:
C G T A A C T G C T A G C T A G C G T A T A C G A C T G C G T A A T G C C G T A A C T G A C T G A C G T A G T C G T C A T C G A
p-value:1e-9
log p-value:-2.210e+01
Information Content per bp:1.766
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.7 +/- 21.6bp
Average Position of motif in Background64.1 +/- 6.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTGACCTGTCCTCYCT
-TGACCTTTGCCCTA-
 A G C T A C G T A C T G G T C A A G T C G T A C A C G T A T C G A C G T G T A C A T G C G C A T A G T C G A T C A G T C C G A T
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TTGACCTGTCCTCYCT
-TGACCTTTNCNT---
 A G C T A C G T A C T G G T C A A G T C G T A C A C G T A T C G A C G T G T A C A T G C G C A T A G T C G A T C A G T C C G A T
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTGACCTGTCCTCYCT
-TGACCTCTGACCCCN
 A G C T A C G T A C T G G T C A A G T C G T A C A C G T A T C G A C G T G T A C A T G C G C A T A G T C G A T C A G T C C G A T
A C G T G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTGACCTGTCCTCYCT
-TGACCTTTGACCTC-
 A G C T A C G T A C T G G T C A A G T C G T A C A C G T A T C G A C G T G T A C A T G C G C A T A G T C G A T C A G T C C G A T
A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTGACCTGTCCTCYCT
-TGACCTYA-------
 A G C T A C G T A C T G G T C A A G T C G T A C A C G T A T C G A C G T G T A C A T G C G C A T A G T C G A T C A G T C C G A T
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTGACCTGTCCTCYCT
-TGACCYCT-------
 A G C T A C G T A C T G G T C A A G T C G T A C A C G T A T C G A C G T G T A C A T G C G C A T A G T C G A T C A G T C C G A T
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTGACCTGTCCTCYCT
-TGACCTTTGCCCCA-
 A G C T A C G T A C T G G T C A A G T C G T A C A C G T A T C G A C G T G T A C A T G C G C A T A G T C G A T C A G T C C G A T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTGACCTGTCCTCYCT
NNNNTGACCTTTNNNN---
 A C G T A C G T A C G T A G C T A C G T A C T G G T C A A G T C G T A C A C G T A T C G A C G T G T A C A T G C G C A T A G T C G A T C A G T C C G A T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTGACCTGTCCTCYCT
-TGACCT---------
 A G C T A C G T A C T G G T C A A G T C G T A C A C G T A T C G A C G T G T A C A T G C G C A T A G T C G A T C A G T C C G A T
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTGACCTGTCCTCYCT
-TGACCTTTGCCCTAN
 A G C T A C G T A C T G G T C A A G T C G T A C A C G T A T C G A C G T G T A C A T G C G C A T A G T C G A T C A G T C C G A T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C