Information for 15-AAGCACATAC (Motif 27)

G T C A C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C G T A C T G A C G T A C T G A G T C A C G T A C G T
p-value:1e-4
log p-value:-9.302e+00
Information Content per bp:1.962
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.8 +/- 25.8bp
Average Position of motif in Background37.7 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AAGCACATAC----
AGCGGCACACACGCAA
 A C G T A C G T G T C A C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AAGCACATAC----
CGAAGCACACAAAATA
 A C G T A C G T G T C A C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AAGCACATAC
AAGCACTTAA
 G T C A C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G T A A G T C
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AAGCACATAC--
--GCACGTACCC
 G T C A C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G T A A G T C A C G T A C G T
A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AAGCACATAC
--GCACGTAY
 G T C A C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G T A A G T C
A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AAGCACATAC
NWAACCACADNN
 A C G T A C G T G T C A C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G T A A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAGCACATAC
AAACCACANN-
 A C G T G T C A C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G T A A G T C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AAGCACATAC---
---CACATTCCAT
 G T C A C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAGCACATAC
WAAGTAAAYA-
 A C G T G T C A C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G T A A G T C
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAGCACATAC
AAACCACAGAN
 A C G T G T C A C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G T A A G T C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C