Information for 12-GGRATAGTGTGANGGG (Motif 21)

C T A G C A T G C T G A C G T A A G C T C G T A A C T G C G A T A C T G A C G T A C T G G T C A A G C T C T A G A C T G A T C G
Reverse Opposite:
T A G C A G T C A G T C C T A G A C G T A G T C G T C A A G T C C G T A T G A C G A C T C T G A A C G T A G C T G A T C A G T C
p-value:1e-8
log p-value:-1.870e+01
Information Content per bp:1.734
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.4 +/- 28.7bp
Average Position of motif in Background53.4 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGRATAGTGTGANGGG
---ATGGGGTGAT---
 C T A G C A T G C T G A C G T A A G C T C G T A A C T G C G A T A C T G A C G T A C T G G T C A A G C T C T A G A C T G A T C G
A C G T A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGRATAGTGTGANGGG
---ATGGGGTGAT---
 C T A G C A T G C T G A C G T A A G C T C G T A A C T G C G A T A C T G A C G T A C T G G T C A A G C T C T A G A C T G A T C G
A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGRATAGTGTGANGGG
---TAGGTGTGAAG--
 C T A G C A T G C T G A C G T A A G C T C G T A A C T G C G A T A C T G A C G T A C T G G T C A A G C T C T A G A C T G A T C G
A C G T A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGRATAGTGTGANGGG
---GTGGGGTGAT---
 C T A G C A T G C T G A C G T A A G C T C G T A A C T G C G A T A C T G A C G T A C T G G T C A A G C T C T A G A C T G A T C G
A C G T A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GGRATAGTGTGANGGG
---AAGGTGTGAA---
 C T A G C A T G C T G A C G T A A G C T C G T A A C T G C G A T A C T G A C G T A C T G G T C A A G C T C T A G A C T G A T C G
A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGRATAGTGTGANGGG
NNNNTTGTGTGCTTNN
 C T A G C A T G C T G A C G T A A G C T C G T A A C T G C G A T A C T G A C G T A C T G G T C A A G C T C T A G A C T G A T C G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

MGA/MA0801.1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GGRATAGTGTGANGGG
----AGGTGTGA----
 C T A G C A T G C T G A C G T A A G C T C G T A A C T G C G A T A C T G A C G T A C T G G T C A A G C T C T A G A C T G A T C G
A C G T A C G T A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGRATAGTGTGANGGG
---GTGGCGTGACNG-
 C T A G C A T G C T G A C G T A A G C T C G T A A C T G C G A T A C T G A C G T A C T G G T C A A G C T C T A G A C T G A T C G
A C G T A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGRATAGTGTGANGGG---
--TATTATGGGATGGATAA
 C T A G C A T G C T G A C G T A A G C T C G T A A C T G C G A T A C T G A C G T A C T G G T C A A G C T C T A G A C T G A T C G A C G T A C G T A C G T
A C G T A C G T C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGRATAGTGTGANGGG
---AAGGTGTKAA---
 C T A G C A T G C T G A C G T A A G C T C G T A A C T G C G A T A C T G A C G T A C T G G T C A A G C T C T A G A C T G A T C G
A C G T A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T