Information for 1-AAATGGCGGA (Motif 1)

T G C A T C G A G T C A G C A T A T C G A T C G G T A C T A C G T A C G T G C A
Reverse Opposite:
A C G T A T G C A T G C C A T G A T G C A T G C C G T A C A G T A G C T A C G T
p-value:1e-20
log p-value:-4.812e+01
Information Content per bp:1.634
Number of Target Sequences with motif168.0
Percentage of Target Sequences with motif17.85%
Number of Background Sequences with motif3675.5
Percentage of Background Sequences with motif8.17%
Average Position of motif in Targets50.4 +/- 26.6bp
Average Position of motif in Background50.4 +/- 36.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:AAATGGCGGA-
TAATGGCGGNC
 T G C A T C G A G T C A G C A T A T C G A T C G G T A C T A C G T A C G T G C A A C G T
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--AAATGGCGGA
CAAGATGGCGGC
 A C G T A C G T T G C A T C G A G T C A G C A T A T C G A T C G G T A C T A C G T A C G T G C A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--AAATGGCGGA-----
NAGANTGGCGGGGNGNA
 A C G T A C G T T G C A T C G A G T C A G C A T A T C G A T C G G T A C T A C G T A C G T G C A A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AAATGGCGGA
CAAGATGGCGGC
 A C G T A C G T T G C A T C G A G T C A G C A T A T C G A T C G G T A C T A C G T A C G T G C A
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.63
Offset:4
Orientation:forward strand
Alignment:AAATGGCGGA----
----GGCGGGAAAH
 T G C A T C G A G T C A G C A T A T C G A T C G G T A C T A C G T A C G T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAATGGCGGA--
RGKGGGCGGAGC
 T G C A T C G A G T C A G C A T A T C G A T C G G T A C T A C G T A C G T G C A A C G T A C G T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AAATGGCGGA--
--CWGGCGGGAA
 T G C A T C G A G T C A G C A T A T C G A T C G G T A C T A C G T A C G T G C A A C G T A C G T
A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AAATGGCGGA--
----GGCGCGCT
 T G C A T C G A G T C A G C A T A T C G A T C G G T A C T A C G T A C G T G C A A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

E2F3/MA0469.2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAATGGCGGA------
AAAAATGGCGCCATTTTT
 A C G T A C G T T G C A T C G A G T C A G C A T A T C G A T C G G T A C T A C G T A C G T G C A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAATGGCGGA---
-BTKGGCGGGAAA
 T G C A T C G A G T C A G C A T A T C G A T C G G T A C T A C G T A C G T G C A A C G T A C G T A C G T
A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A