Information for 1-TCCCGACAAT (Motif 4)

C A G T A G T C A G T C A G T C A T C G T C G A A G T C G C T A C G T A A C G T
Reverse Opposite:
G T C A A C G T C A G T A C T G A C G T A T G C A C T G A C T G C T A G G C T A
p-value:1e-13
log p-value:-3.018e+01
Information Content per bp:1.850
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif17.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets45.8 +/- 21.2bp
Average Position of motif in Background47.6 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:TCCCGACAAT---
----GACAATGNN
 C A G T A G T C A G T C A G T C A T C G T C G A A G T C G C T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

E2F8/MA0865.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TCCCGACAAT
TTTCCCGCCAAA
 A C G T A C G T C A G T A G T C A G T C A G T C A T C G T C G A A G T C G C T A C G T A A C G T
G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TCCCGACAAT
TTTCCCGCCMAV
 A C G T A C G T C A G T A G T C A G T C A G T C A T C G T C G A A G T C G C T A C G T A A C G T
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

E2F7/MA0758.1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TCCCGACAAT-
TTTTCCCGCCAAAA
 A C G T A C G T A C G T C A G T A G T C A G T C A G T C A T C G T C G A A G T C G C T A C G T A A C G T A C G T
C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TCCCGACAAT---
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T C A G T A G T C A G T C A G T C A T C G T C G A A G T C G C T A C G T A A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCCCGACAAT
TTCCCGCCWG-
 A C G T C A G T A G T C A G T C A G T C A T C G T C G A A G T C G C T A C G T A A C G T
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T

E2F4/MA0470.1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TCCCGACAAT
NNTTCCCGCCC--
 A C G T A C G T A C G T C A G T A G T C A G T C A G T C A T C G T C G A A G T C G C T A C G T A A C G T
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCCCGACAAT------
TNCNNAACAATTTTTNC
 A C G T C A G T A G T C A G T C A G T C A T C G T C G A A G T C G C T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TCCCGACAAT
VDTTTCCCGCCA--
 A C G T A C G T A C G T A C G T C A G T A G T C A G T C A G T C A T C G T C G A A G T C G C T A C G T A A C G T
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCCCGACAAT---
NNCNNAACAATTNT
 A C G T C A G T A G T C A G T C A G T C A T C G T C G A A G T C G C T A C G T A A C G T A C G T A C G T A C G T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T