Information for 6-CCTGCCTAAAGTGAAT (Motif 17)

A G T C G T A C A C G T A T C G A G T C A G T C A G C T C G T A G T C A C G T A A C T G A C G T A T C G G T C A G T C A A C G T
Reverse Opposite:
G T C A A C G T A C G T A T G C G T C A A G T C A C G T A C G T A C G T C T G A A C T G C T A G A T G C G T C A A C T G A C T G
p-value:1e-9
log p-value:-2.293e+01
Information Content per bp:1.776
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.8 +/- 16.0bp
Average Position of motif in Background44.0 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CCTGCCTAAAGTGAAT
------AAAAGTCAA-
 A G T C G T A C A C G T A T C G A G T C A G T C A G C T C G T A G T C A C G T A A C T G A C G T A T C G G T C A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCTGCCTAAAGTGAAT
AGAGTCCAAAGTCCA-
 A G T C G T A C A C G T A T C G A G T C A G T C A G C T C G T A G T C A C G T A A C T G A C G T A T C G G T C A G T C A A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

IRF7/MA0772.1/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CCTGCCTAAAGTGAAT--
----ACGAAAGCGAAAGT
 A G T C G T A C A C G T A T C G A G T C A G T C A G C T C G T A G T C A C G T A A C T G A C G T A T C G G T C A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CCTGCCTAAAGTGAAT
--TGCCCTNAGGGCA-
 A G T C G T A C A C G T A T C G A G T C A G T C A G C T C G T A G T C A C G T A A C T G A C G T A T C G G T C A G T C A A C G T
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCTGCCTAAAGTGAAT
-NTGCCCANNGGTNA-
 A G T C G T A C A C G T A T C G A G T C A G T C A G C T C G T A G T C A C G T A A C T G A C G T A T C G G T C A G T C A A C G T
A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCTGCCTAAAGTGAAT
CANAGNNCAAAGTCCA-
 A C G T A G T C G T A C A C G T A T C G A G T C A G T C A G C T C G T A G T C A C G T A A C T G A C G T A T C G G T C A G T C A A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CCTGCCTAAAGTGAAT
--TGCCCCAGGGCA--
 A G T C G T A C A C G T A T C G A G T C A G T C A G C T C G T A G T C A C G T A A C T G A C G T A T C G G T C A G T C A A C G T
A C G T A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CCTGCCTAAAGTGAAT
-CCGCCCAAGGGCAG-
 A G T C G T A C A C G T A T C G A G T C A G T C A G C T C G T A G T C A C G T A A C T G A C G T A T C G G T C A G T C A A C G T
A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CCTGCCTAAAGTGAAT---
---GGCAAAAGTCCAATAA
 A G T C G T A C A C G T A T C G A G T C A G T C A G C T C G T A G T C A C G T A A C T G A C G T A T C G G T C A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCTGCCTAAAGTGAAT
-NTGCCCTAGGGCAA-
 A G T C G T A C A C G T A T C G A G T C A G T C A G C T C G T A G T C A C G T A A C T G A C G T A T C G G T C A G T C A A C G T
A C G T C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A A C G T