Information for 4-TCCGGCTTCCGCC (Motif 7)

A C G T A G T C G T A C A C T G A C T G A G T C A C G T A G C T A G T C A G T C C T A G A G T C A T G C
Reverse Opposite:
A T C G A C T G A G T C A C T G C T A G C T G A C G T A A C T G A G T C A G T C A C T G A C T G C G T A
p-value:1e-10
log p-value:-2.475e+01
Information Content per bp:1.885
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif13.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.0 +/- 24.9bp
Average Position of motif in Background57.2 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0124.1_Gabpa_2/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCCGGCTTCCGCC----
-CCGTCTTCCCCCTCAC
 A C G T A G T C G T A C A C T G A C T G A G T C A C G T A G C T A G T C A G T C C T A G A G T C A T G C A C G T A C G T A C G T A C G T
A C G T T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TCCGGCTTCCGCC-
----GGTCCCGCCC
 A C G T A G T C G T A C A C T G A C T G A G T C A C G T A G C T A G T C A G T C C T A G A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCCGGCTTCCGCC-
-CTGTCTGTCACCT
 A C G T A G T C G T A C A C T G A C T G A G T C A C G T A G C T A G T C A G T C C T A G A G T C A T G C A C G T
A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

SPDEF/MA0686.1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TCCGGCTTCCGCC
TACATCCGGGT------
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A C T G A C T G A G T C A C G T A G C T A G T C A G T C C T A G A G T C A T G C
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TCCGGCTTCCGCC
GTACATCCGGATTTTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A C T G A C T G A G T C A C G T A G C T A G T C A G T C C T A G A G T C A T G C
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TCCGGCTTCCGCC-
---NCTTCCCGCCC
 A C G T A G T C G T A C A C T G A C T G A G T C A C G T A G C T A G T C A G T C C T A G A G T C A T G C A C G T
A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

E2F4/MA0470.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TCCGGCTTCCGCC-
---NNTTCCCGCCC
 A C G T A G T C G T A C A C T G A C T G A G T C A C G T A G C T A G T C A G T C C T A G A G T C A T G C A C G T
A C G T A C G T A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TCCGGCTTCCGCC
NRYTTCCGGY-------
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A C T G A C T G A G T C A C G T A G C T A G T C A G T C C T A G A G T C A T G C
G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TCCGGCTTCCGCC
ACATCCTGNT------
 A C G T A C G T A C G T A C G T A G T C G T A C A C T G A C T G A G T C A C G T A G C T A G T C A G T C C T A G A G T C A T G C
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

ELF1/MA0473.2/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TCCGGCTTCCGCC
NACTTCCGGGTT-----
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A C T G A C T G A G T C A C G T A G C T A G T C A G T C C T A G A G T C A T G C
A G T C C T G A G A T C C G A T A G C T A G T C A G T C A C T G A T C G C A T G C G A T G C A T A C G T A C G T A C G T A C G T A C G T