Information for 1-AGAGCGCGCY (Motif 1)

C T G A T C A G C T G A T A C G T A G C A T C G A T G C A T C G A T G C G A T C
Reverse Opposite:
C T A G A T C G A T G C A T C G A T G C A T C G A T G C G A C T A G T C G A C T
p-value:1e-23
log p-value:-5.514e+01
Information Content per bp:1.673
Number of Target Sequences with motif269.0
Percentage of Target Sequences with motif28.32%
Number of Background Sequences with motif6899.7
Percentage of Background Sequences with motif15.28%
Average Position of motif in Targets52.0 +/- 23.5bp
Average Position of motif in Background50.9 +/- 36.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0008.1_E2F2_1/Jaspar

Match Rank:1
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---AGAGCGCGCY--
ATAAAGGCGCGCGAT
 A C G T A C G T A C G T C T G A T C A G C T G A T A C G T A G C A T C G A T G C A T C G A T G C G A T C A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---AGAGCGCGCY--
ATAAGGGCGCGCGAT
 A C G T A C G T A C G T C T G A T C A G C T G A T A C G T A G C A T C G A T G C A T C G A T G C G A T C A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.80
Offset:2
Orientation:forward strand
Alignment:AGAGCGCGCY
--AGCGCGCC
 C T G A T C A G C T G A T A C G T A G C A T C G A T G C A T C G A T G C G A T C
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---AGAGCGCGCY---
NCANGCGCGCGCGCCA
 A C G T A C G T A C G T C T G A T C A G C T G A T A C G T A G C A T C G A T G C A T C G A T G C G A T C A C G T A C G T A C G T
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGAGCGCGCY-----
TTGGGGGCGCCCCTAG
 A C G T C T G A T C A G C T G A T A C G T A G C A T C G A T G C A T C G A T G C G A T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGAGCGCGCY------
--GCCGCGCAGTGCGT
 C T G A T C A G C T G A T A C G T A G C A T C G A T G C A T C G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

E2F3/MA0469.2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGAGCGCGCY------
AAAAATGGCGCCATTTTT
 A C G T A C G T C T G A T C A G C T G A T A C G T A G C A T C G A T G C A T C G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGAGCGCGCY---
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T C T G A T C A G C T G A T A C G T A G C A T C G A T G C A T C G A T G C G A T C A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AGAGCGCGCY----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G C T G A T A C G T A G C A T C G A T G C A T C G A T G C G A T C A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.54
Offset:-8
Orientation:forward strand
Alignment:--------AGAGCGCGCY-
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G C T G A T A C G T A G C A T C G A T G C A T C G A T G C G A T C A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A