Information for 1-TSGYACGCTT (Motif 9)

A C G T A T G C T C A G A G C T C G T A A G T C A C T G A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A G T C A C T G A C G T C T G A A G T C A T C G C G T A
p-value:1e-11
log p-value:-2.736e+01
Information Content per bp:1.902
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.4 +/- 20.6bp
Average Position of motif in Background21.5 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TSGYACGCTT
---CAAGCTT
 A C G T A T G C T C A G A G C T C G T A A G T C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TSGYACGCTT
TBGCACGCAA
 A C G T A T G C T C A G A G C T C G T A A G T C A C T G A G T C A C G T A C G T
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TSGYACGCTT
---CACGCA-
 A C G T A T G C T C A G A G C T C G T A A G T C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T

Hes1/MA1099.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TSGYACGCTT-
-GGCACGCGTC
 A C G T A T G C T C A G A G C T C G T A A G T C A C T G A G T C A C G T A C G T A C G T
A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

PB0094.1_Zfp128_1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TSGYACGCTT----
TTNGGGTACGCCNNANN
 A C G T A C G T A C G T A C G T A T G C T C A G A G C T C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TSGYACGCTT
-----NGCTN
 A C G T A T G C T C A G A G C T C G T A A G T C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TSGYACGCTT---
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A T G C T C A G A G C T C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

PB0008.1_E2F2_1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TSGYACGCTT----
NTCGCGCGCCTTNNN
 A C G T A C G T A T G C T C A G A G C T C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TSGYACGCTT
--GCACGTAY
 A C G T A T G C T C A G A G C T C G T A A G T C A C T G A G T C A C G T A C G T
A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:TSGYACGCTT--
------GCTTCC
 A C G T A T G C T C A G A G C T C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C