Information for 3-TTATCCACTAAGAATT (Motif 5)

A C G T A C G T C G T A C G A T A G T C A G T C C G T A T A G C C G A T C G T A C G T A A C T G C G T A G C T A A C G T A C G T
Reverse Opposite:
C G T A C G T A C G A T A C G T A G T C A C G T A C G T C G T A A C T G A C G T A C T G A C T G C G T A A C G T C G T A G T C A
p-value:1e-14
log p-value:-3.367e+01
Information Content per bp:1.927
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.5 +/- 17.2bp
Average Position of motif in Background17.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0115.1_Nkx2-6/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTATCCACTAAGAATT
TAAGCCACTTAACATT
 A C G T A C G T C G T A C G A T A G T C A G T C C G T A T A G C C G A T C G T A C G T A A C T G C G T A G C T A A C G T A C G T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

PH0114.1_Nkx2-5/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTATCCACTAAGAATT
TAAGCCACTTGAATTT
 A C G T A C G T C G T A C G A T A G T C A G T C C G T A T A G C C G A T C G T A C G T A A C T G C G T A G C T A A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TTATCCACTAAGAATT
--ATCCAC--------
 A C G T A C G T C G T A C G A T A G T C A G T C C G T A T A G C C G A T C G T A C G T A A C T G C G T A G C T A A C G T A C G T
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTATCCACTAAGAATT
CATAACCACTTAACAAC
 A C G T A C G T A C G T C G T A C G A T A G T C A G T C C G T A T A G C C G A T C G T A C G T A A C T G C G T A G C T A A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

PB0172.1_Sox1_2/Jaspar

Match Rank:5
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TTATCCACTAAGAATT----
-----NNNTAACAATTATAN
 A C G T A C G T C G T A C G A T A G T C A G T C C G T A T A G C C G A T C G T A C G T A A C T G C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PH0113.1_Nkx2-4/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TTATCCACTAAGAATT
TAAGCCACTTGAAATT
 A C G T A C G T C G T A C G A T A G T C A G T C C G T A T A G C C G A T C G T A C G T A A C T G C G T A G C T A A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TTATCCACTAAGAATT----------
-TGCCNACCWAGAATACTDTATCMAR
 A C G T A C G T C G T A C G A T A G T C A G T C C G T A T A G C C G A T C G T A C G T A A C T G C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T C A T G G A T C G T A C G A T C C T G A A T G C G A T C C G T A C T G A C T A G T G C A T G C A A C G T C G T A A G T C G A C T C G A T C G A T T C G A G A C T G A T C T G A C C G T A C T A G

PH0171.1_Nkx2-1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TTATCCACTAAGAATT
TAAGCCACTTGAAATT
 A C G T A C G T C G T A C G A T A G T C A G T C C G T A T A G C C G A T C G T A C G T A A C T G C G T A G C T A A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

PH0057.1_Hoxb13/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TTATCCACTAAGAATT-
-AACCCAATAAAATTCG
 A C G T A C G T C G T A C G A T A G T C A G T C C G T A T A G C C G A T C G T A C G T A A C T G C G T A G C T A A C G T A C G T A C G T
A C G T T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TTATCCACTAAGAATT
ATTTTCCATT-------
 A C G T A C G T A C G T C G T A C G A T A G T C A G T C C G T A T A G C C G A T C G T A C G T A A C T G C G T A G C T A A C G T A C G T
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T