Information for 6-CTTTGCCACG (Motif 27)

A G T C C G A T A C G T A C G T A C T G A G T C A T G C C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A T C G C T A G A G T C C G T A C G T A C G T A A C T G
p-value:1e-8
log p-value:-2.046e+01
Information Content per bp:1.940
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets28.2 +/- 23.0bp
Average Position of motif in Background70.2 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTTTGCCACG
HTTTCCCASG
 A G T C C G A T A C G T A C G T A C T G A G T C A T G C C G T A A G T C A C T G
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

CREB3L1/MA0839.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTTTGCCACG------
--ATGCCACGTCATCA
 A G T C C G A T A C G T A C G T A C T G A G T C A T G C C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTTTGCCACG
--TTGCCAAG
 A G T C C G A T A C G T A C G T A C T G A G T C A T G C C G T A A G T C A C T G
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTTTGCCACG---
NNCGTTGCTATGGNN
 A C G T A C G T A G T C C G A T A C G T A C G T A C T G A G T C A T G C C G T A A G T C A C T G A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTTTGCCACG--
CCGCATAGCAACGGA
 A C G T A C G T A C G T A G T C C G A T A C G T A C G T A C T G A G T C A T G C C G T A A G T C A C T G A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0147.1_Max_2/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTTTGCCACG------
--GTGCCACGCGACTG
 A G T C C G A T A C G T A C G T A C T G A G T C A T G C C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTTTGCCACG
ATTTTCCATT
 A G T C C G A T A C G T A C G T A C T G A G T C A T G C C G T A A G T C A C T G
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

Creb3l2/MA0608.1/Jaspar

Match Rank:8
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CTTTGCCACG---
----GCCACGTGT
 A G T C C G A T A C G T A C G T A C T G A G T C A T G C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTTTGCCACG
NNTTGGCANN
 A G T C C G A T A C G T A C G T A C T G A G T C A T G C C G T A A G T C A C T G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTTTGCCACG--
NNAATTAGTCACGGT
 A C G T A C G T A C G T A G T C C G A T A C G T A C G T A C T G A G T C A T G C C G T A A G T C A C T G A C G T A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T