Information for 6-YWTTGTKRWGTAG (Motif 16)

A G T C C G A T A C G T A C G T A C T G A C G T A C T G C T G A G C A T A C T G C G A T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A G T C C G T A A G C T G T A C C G T A A G T C C G T A C G T A C G T A C T A G
p-value:1e-11
log p-value:-2.634e+01
Information Content per bp:1.845
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif13.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets49.0 +/- 31.3bp
Average Position of motif in Background46.0 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-YWTTGTKRWGTAG
CCATTGTTNY----
 A C G T A G T C C G A T A C G T A C G T A C T G A C G T A C T G C T G A G C A T A C T G C G A T C G T A A C T G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:YWTTGTKRWGTAG
CTTTGT-------
 A G T C C G A T A C G T A C G T A C T G A C G T A C T G C T G A G C A T A C T G C G A T C G T A A C T G
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-YWTTGTKRWGTAG
CCWTTGTY------
 A C G T A G T C C G A T A C G T A C G T A C T G A C G T A C T G C T G A G C A T A C T G C G A T C G T A A C T G
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:YWTTGTKRWGTAG
-ATTGTT------
 A G T C C G A T A C G T A C G T A C T G A C G T A C T G C T G A G C A T A C T G C G A T C G T A A C T G
A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----YWTTGTKRWGTAG
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A C T G A C G T A C T G C T G A G C A T A C T G C G A T C G T A A C T G
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:YWTTGTKRWGTAG--
CTTTGTTATGCAAAT
 A G T C C G A T A C G T A C G T A C T G A C G T A C T G C T G A G C A T A C T G C G A T C G T A A C T G A C G T A C G T
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-YWTTGTKRWGTAG
CCWTTGTYYB----
 A C G T A G T C C G A T A C G T A C G T A C T G A C G T A C T G C T G A G C A T A C T G C G A T C G T A A C T G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----YWTTGTKRWGTAG
GTATCTATTGTTCTTTA-
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A C T G A C G T A C T G C T G A G C A T A C T G C G A T C G T A A C T G
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A A C G T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--YWTTGTKRWGTAG
CTCATTGTC------
 A C G T A C G T A G T C C G A T A C G T A C G T A C T G A C G T A C T G C T G A G C A T A C T G C G A T C G T A A C T G
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:YWTTGTKRWGTAG
-ATTGTTTAN---
 A G T C C G A T A C G T A C G T A C T G A C G T A C T G C T G A G C A T A C T G C G A T C G T A A C T G
A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T