Information for 2-TCCACTATTCTAC (Motif 4)

A C G T A G T C G T A C G T C A A G T C A C G T C G T A A C G T A C G T A G T C A G C T C G T A A G T C
Reverse Opposite:
A C T G A C G T C T G A A C T G C G T A C G T A A C G T C G T A A C T G C A G T A C T G A C T G C G T A
p-value:1e-10
log p-value:-2.399e+01
Information Content per bp:1.944
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.0 +/- 14.2bp
Average Position of motif in Background48.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0128.1_Gcm1_2/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCCACTATTCTAC
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C G T C A A G T C A C G T C G T A A C G T A C G T A G T C A G C T C G T A A G T C
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCCACTATTCTAC
ATCCAC--------
 A C G T A C G T A G T C G T A C G T C A A G T C A C G T C G T A A C G T A C G T A G T C A G C T C G T A A G T C
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TCCACTATTCTAC-
----CTATTTTTGG
 A C G T A G T C G T A C G T C A A G T C A C G T C G T A A C G T A C G T A G T C A G C T C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

PB0137.1_Irf3_2/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCCACTATTCTAC
NNGCACCTTTCTCC
 A C G T A C G T A G T C G T A C G T C A A G T C A C G T C G T A A C G T A C G T A G T C A G C T C G T A A G T C
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

PB0070.1_Sox30_1/Jaspar

Match Rank:5
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TCCACTATTCTAC
ANNTCCATTGTTCNNN
 A C G T A C G T A C G T A C G T A G T C G T A C G T C A A G T C A C G T C G T A A C G T A C G T A G T C A G C T C G T A A G T C
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

SPI1/MA0080.4/Jaspar

Match Rank:6
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----TCCACTATTCTAC
TACTTCCGCTTTTT---
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C G T C A A G T C A C G T C G T A A C G T A C G T A G T C A G C T C G T A A G T C
G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TCCACTATTCTAC-----
-CNNNTATTGTTCNNNNN
 A C G T A G T C G T A C G T C A A G T C A C G T C G T A A C G T A C G T A G T C A G C T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0173.1_Sox21_2/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:TCCACTATTCTAC-----
-AATCAATTGTTCCGCTA
 A C G T A G T C G T A C G T C A A G T C A C G T C G T A A C G T A C G T A G T C A G C T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:forward strand
Alignment:TCCACTATTCTAC
----CCATTGTTC
 A C G T A G T C G T A C G T C A A G T C A C G T C G T A A C G T A C G T A G T C A G C T C G T A A G T C
A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:TCCACTATTCTAC
---NCCATTGTTY
 A C G T A G T C G T A C G T C A A G T C A C G T C G T A A C G T A C G T A G T C A G C T C G T A A G T C
A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T