Information for 2-WGATADTCATGGW (Motif 3)

C G T A A T C G C G T A C A G T C G T A C A G T A C G T G T A C C G T A A C G T A C T G C A T G C G A T
Reverse Opposite:
C G T A G T A C A G T C C G T A C G A T A C T G C G T A G T C A C G A T G T C A C G A T A T G C G C A T
p-value:1e-15
log p-value:-3.611e+01
Information Content per bp:1.749
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif15.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets46.5 +/- 22.4bp
Average Position of motif in Background54.1 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:WGATADTCATGGW---
--ACATTCATGACACG
 C G T A A T C G C G T A C A G T C G T A C A G T A C G T G T A C C G T A A C G T A C T G C A T G C G A T A C G T A C G T A C G T
A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:2
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:WGATADTCATGGW
-----GTCATN--
 C G T A A T C G C G T A C A G T C G T A C A G T A C G T G T A C C G T A A C G T A C T G C A T G C G A T
A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:3
Score:0.65
Offset:4
Orientation:forward strand
Alignment:WGATADTCATGGW
----AGTCACGC-
 C G T A A T C G C G T A C A G T C G T A C A G T A C G T G T A C C G T A A C G T A C T G C A T G C G A T
A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:WGATADTCATGGW
GAATATTCAT---
 C G T A A T C G C G T A C A G T C G T A C A G T A C G T G T A C C G T A A C G T A C T G C A T G C G A T
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:WGATADTCATGGW
GHATATKCAT---
 C G T A A T C G C G T A C A G T C G T A C A G T A C G T G T A C C G T A A C G T A C T G C A T G C G A T
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T

FOS/MA0476.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:WGATADTCATGGW
TGTGACTCATT--
 C G T A A T C G C G T A C A G T C G T A C A G T A C G T G T A C C G T A A C G T A C T G C A T G C G A T
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--WGATADTCATGGW--
GACCACATTCATACAAT
 A C G T A C G T C G T A A T C G C G T A C A G T C G T A C A G T A C G T G T A C C G T A A C G T A C T G C A T G C G A T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

JUND/MA0491.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:WGATADTCATGGW
GGTGACTCATC--
 C G T A A T C G C G T A C A G T C G T A C A G T A C G T G T A C C G T A A C G T A C T G C A T G C G A T
C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--WGATADTCATGGW
ATGAATATTCATGAG
 A C G T A C G T C G T A A T C G C G T A C A G T C G T A C A G T A C G T G T A C C G T A A C G T A C T G C A T G C G A T
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

FOSL1/MA0477.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:WGATADTCATGGW
GGTGACTCATG--
 C G T A A T C G C G T A C A G T C G T A C A G T A C G T G T A C C G T A A C G T A C T G C A T G C G A T
C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G A C G T A C G T