Information for 13-GTAAAATATTCTA (Motif 22)

A C T G C G A T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A G T C A C G T C G T A
Reverse Opposite:
C G A T G T C A C T A G C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T G C T A A G T C
p-value:1e-9
log p-value:-2.207e+01
Information Content per bp:1.923
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.6 +/- 21.3bp
Average Position of motif in Background47.8 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTAAAATATTCTA---
--CTAATATTGCTAAA
 A C T G C G A T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A G T C A C G T C G T A A C G T A C G T A C G T
A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTAAAATATTCTA---
--CTAATATTGCTAAA
 A C T G C G A T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A G T C A C G T C G T A A C G T A C G T A C G T
A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

MF0010.1_Homeobox_class/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GTAAAATATTCTA
---AATTATT---
 A C T G C G A T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A G T C A C G T C G T A
A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTAAAATATTCTA
--AAGATATCCTT
 A C T G C G A T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A G T C A C G T C G T A
A C G T A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

PH0077.1_Hoxd12/Jaspar

Match Rank:5
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------GTAAAATATTCTA
CAAGGTCGTAAAATCTT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A G T C A C G T C G T A
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T A C G T A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTAAAATATTCTA---
-TAGAANVTTCTAGAA
 A C T G C G A T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A G T C A C G T C G T A A C G T A C G T A C G T
A C G T G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

PH0076.1_Hoxd11/Jaspar

Match Rank:7
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------GTAAAATATTCTA
TAAGGTCGTAAAATCCT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A G T C A C G T C G T A
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T A C G T A C G T A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GTAAAATATTCTA
GGTCGTAAAAA------
 A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A G T C A C G T C G T A
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GTAAAATATTCTA
TTAAGAACAATAAATT-
 A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A G T C A C G T C G T A
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:10
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------GTAAAATATTCTA
AAACCTCGTAAAATTT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A G T C A C G T C G T A
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T A C G T A C G T A C G T A C G T