Information for 6-AAACCCTAYAAAT (Motif 5)

C G T A C G T A T C G A G T A C A G T C A G T C A G C T C G T A A G T C C T G A G T C A C T G A A G C T
Reverse Opposite:
C T G A A G C T A C G T A G C T T C A G A C G T C T G A C T A G C T A G A C T G A G C T A C G T A C G T
p-value:1e-58
log p-value:-1.342e+02
Information Content per bp:1.765
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif43.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets53.9 +/- 31.2bp
Average Position of motif in Background47.1 +/- 36.5bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2A/MA0052.3/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AAACCCTAYAAAT---
----TCTAAAAATAGA
 C G T A C G T A T C G A G T A C A G T C A G T C A G C T C G T A A G T C C T G A G T C A C T G A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AAACCCTAYAAAT
---CCYMATAAAA
 C G T A C G T A T C G A G T A C A G T C A G T C A G C T C G T A A G T C C T G A G T C A C T G A A G C T
A C G T A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

MEF2D/MA0773.1/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AAACCCTAYAAAT---
----ACTATAAATAGA
 C G T A C G T A T C G A G T A C A G T C A G T C A G C T C G T A A G T C C T G A G T C A C T G A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

MEF2B/MA0660.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AAACCCTAYAAAT---
----GCTATAAATAGC
 C G T A C G T A T C G A G T A C A G T C A G T C A G C T C G T A A G T C C T G A G T C A C T G A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

PB0141.1_Isgf3g_2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AAACCCTAYAAAT
GCAAAACATTACTA--
 A C G T A C G T A C G T C G T A C G T A T C G A G T A C A G T C A G T C A G C T C G T A A G T C C T G A G T C A C T G A A G C T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AAACCCTAYAAAT-------
-----GTATAAAAGGCGGGG
 C G T A C G T A T C G A G T A C A G T C A G T C A G C T C G T A A G T C C T G A G T C A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AAACCCTAYAAAT-------
-----GTATAAAAGGCGGGG
 C G T A C G T A T C G A G T A C A G T C A G T C A G C T C G T A A G T C C T G A G T C A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AAACCCTAYAAAT---
----GCTAAAAATAGC
 C G T A C G T A T C G A G T A C A G T C A G T C A G C T C G T A A G T C C T G A G T C A C T G A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

PH0057.1_Hoxb13/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AAACCCTAYAAAT----
-AACCCAATAAAATTCG
 C G T A C G T A T C G A G T A C A G T C A G T C A G C T C G T A A G T C C T G A G T C A C T G A A G C T A C G T A C G T A C G T A C G T
A C G T T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AAACCCTAYAAAT---
----DCYAAAAATAGM
 C G T A C G T A T C G A G T A C A G T C A G T C A G C T C G T A A G T C C T G A G T C A C T G A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C