Information for 25-AGTTTCTRTAGAA (Motif 34)

C G T A A C T G A C G T A C G T A C G T A G T C A C G T C T A G A G C T C G T A A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T C T G A A G T C C G T A A C T G C G T A C G T A C G T A A G T C A C G T
p-value:1e-2
log p-value:-4.653e+00
Information Content per bp:1.941
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.3 +/- 13.1bp
Average Position of motif in Background50.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AGTTTCTRTAGAA
-ANTTCTNNAGAA
 C G T A A C T G A C G T A C G T A C G T A G T C A C G T C T A G A G C T C G T A A C T G C G T A C G T A
A C G T C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A

Stat6/MA0520.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AGTTTCTRTAGAA---
-ANTTCTCAGGAANNN
 C G T A A C T G A C G T A C G T A C G T A G T C A C G T C T A G A G C T C G T A A C T G C G T A C G T A A C G T A C G T A C G T
A C G T C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:3
Score:0.71
Offset:3
Orientation:forward strand
Alignment:AGTTTCTRTAGAA
---TTCCKNAGAA
 C G T A A C T G A C G T A C G T A C G T A G T C A C G T C T A G A G C T C G T A A C T G C G T A C G T A
A C G T A C G T A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A

PB0035.1_Irf5_1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGTTTCTRTAGAA
NTGGTTTCGGTTNNN
 A C G T A C G T C G T A A C T G A C G T A C G T A C G T A G T C A C G T C T A G A G C T C G T A A C T G C G T A C G T A
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

PB0034.1_Irf4_1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGTTTCTRTAGAA
TNTGGTTTCGATACN-
 A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T A G T C A C G T C T A G A G C T C G T A A C T G C G T A C G T A
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGTTTCTRTAGAA
TGGTTTCAGT----
 A C G T C G T A A C T G A C G T A C G T A C G T A G T C A C G T C T A G A G C T C G T A A C T G C G T A C G T A
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----AGTTTCTRTAGAA
NNNTTGGTTTCGNTNNN-
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T A G T C A C G T C T A G A G C T C G T A A C T G C G T A C G T A
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGTTTCTRTAGAA
TNAGTTTCGATTTTN
 A C G T A C G T C G T A A C T G A C G T A C G T A C G T A G T C A C G T C T A G A G C T C G T A A C T G C G T A C G T A
C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

PB0194.1_Zbtb12_2/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGTTTCTRTAGAA----
--TATCATTAGAACGCT
 C G T A A C T G A C G T A C G T A C G T A G T C A C G T C T A G A G C T C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGTTTCTRTAGAA----
NAGTTTCABTHTGACTNW
 A C G T C G T A A C T G A C G T A C G T A C G T A G T C A C G T C T A G A G C T C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A