Information for 20-AATWATCCAS (Motif 32)

G T C A C G T A A C G T C G T A C G T A A C G T G T A C A G T C C G T A A T G C
Reverse Opposite:
A T C G A C G T A C T G A C T G C G T A A C G T C G A T C G T A A C G T A C G T
p-value:1e-3
log p-value:-8.669e+00
Information Content per bp:1.891
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif28.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets56.6 +/- 24.0bp
Average Position of motif in Background48.7 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)2.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:AATWATCCAS
-ATAATCCC-
 G T C A C G T A A C G T C G T A C G T A A C G T G T A C A G T C C G T A A T G C
A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AATWATCCAS----
NNTAATCCNGNCNN
 G T C A C G T A A C G T C G T A C G T A A C G T G T A C A G T C C G T A A T G C A C G T A C G T A C G T A C G T
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

Pitx1/MA0682.1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AATWATCCAS
-TTAATCCC-
 G T C A C G T A A C G T C G T A C G T A A C G T G T A C A G T C C G T A A T G C
A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T

PITX3/MA0714.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AATWATCCAS
CTTAATCCC-
 G T C A C G T A A C G T C G T A C G T A A C G T G T A C A G T C C G T A A T G C
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.70
Offset:4
Orientation:forward strand
Alignment:AATWATCCAS
----ATCCAC
 G T C A C G T A A C G T C G T A C G T A A C G T G T A C A G T C C G T A A T G C
A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

POU4F1/MA0790.1/Jaspar

Match Rank:6
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----AATWATCCAS
CATTAATTATTCAT
 A C G T A C G T A C G T A C G T G T C A C G T A A C G T C G T A C G T A A C G T G T A C A G T C C G T A A T G C
G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AATWATCCAS
TGAATTATGCAT
 A C G T A C G T G T C A C G T A A C G T C G T A C G T A A C G T G T A C A G T C C G T A A T G C
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

OTX2/MA0712.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AATWATCCAS
-TTAATCCT-
 G T C A C G T A A C G T C G T A C G T A A C G T G T A C A G T C C G T A A T G C
A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AATWATCCAS
--TAATCCCN
 G T C A C G T A A C G T C G T A C G T A A C G T G T A C A G T C C G T A A T G C
A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

PH0126.1_Obox6/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AATWATCCAS----
CNATAATCCGNTTNT
 A C G T G T C A C G T A A C G T C G T A C G T A A C G T G T A C A G T C C G T A A T G C A C G T A C G T A C G T A C G T
T A G C C T G A G C T A C G A T C G T A C G T A A C G T G T A C A G T C A T C G G A C T C G A T G A C T C G A T C A G T