Information for 22-CMCTMGCAWAWTCCMS (Motif 28)

G T A C G T A C A G T C A C G T G T A C C T A G G T A C C G T A C G A T C G T A C G T A A C G T A G T C A G T C G T C A A T G C
Reverse Opposite:
A T C G A C G T A C T G A C T G C G T A C G A T A C G T C G T A A C G T A C T G A G T C A C T G C G T A A C T G A C T G A C T G
p-value:1e-6
log p-value:-1.575e+01
Information Content per bp:1.843
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.7 +/- 30.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CMCTMGCAWAWTCCMS
-----GGAAATTCCC-
 G T A C G T A C A G T C A C G T G T A C C T A G G T A C C G T A C G A T C G T A C G T A A C G T A G T C A G T C G T C A A T G C
A C G T A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:2
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CMCTMGCAWAWTCCMS----
------NNTAATCCNGNCNN
 G T A C G T A C A G T C A C G T G T A C C T A G G T A C C G T A C G A T C G T A C G T A A C G T A G T C A G T C G T C A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CMCTMGCAWAWTCCMS
-----GGAAATTCCC-
 G T A C G T A C A G T C A C G T G T A C C T A G G T A C C G T A C G A T C G T A C G T A A C G T A G T C A G T C G T C A A T G C
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

PITX3/MA0714.1/Jaspar

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CMCTMGCAWAWTCCMS
------CTTAATCCC-
 G T A C G T A C A G T C A C G T G T A C C T A G G T A C C G T A C G A T C G T A C G T A A C G T A G T C A G T C G T C A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T

PH0015.1_Crx/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CMCTMGCAWAWTCCMS----
----AGGCTAATCCCCAANG
 G T A C G T A C A G T C A C G T G T A C C T A G G T A C C G T A C G A T C G T A C G T A A C G T A G T C A G T C G T C A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.55
Offset:8
Orientation:forward strand
Alignment:CMCTMGCAWAWTCCMS
--------TAATCCCN
 G T A C G T A C A G T C A C G T G T A C C T A G G T A C C G T A C G A T C G T A C G T A A C G T A G T C A G T C G T C A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

TEAD4/MA0809.1/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CMCTMGCAWAWTCCMS
------CACATTCCAT
 G T A C G T A C A G T C A C G T G T A C C T A G G T A C C G T A C G A T C G T A C G T A A C G T A G T C A G T C G T C A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CMCTMGCAWAWTCCMS
CAATCACTGGCAGAAT----
 A C G T A C G T A C G T A C G T G T A C G T A C A G T C A C G T G T A C C T A G G T A C C G T A C G A T C G T A C G T A A C G T A G T C A G T C G T C A A T G C
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CMCTMGCAWAWTCCMS
-------TTAATCCC-
 G T A C G T A C A G T C A C G T G T A C C T A G G T A C C G T A C G A T C G T A C G T A A C G T A G T C A G T C G T C A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CMCTMGCAWAWTCCMS----
---NNNATTAATCCGNTTNA
 G T A C G T A C A G T C A C G T G T A C C T A G G T A C C G T A C G A T C G T A C G T A A C G T A G T C A G T C G T C A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A