Information for 7-GGTTGTCATGACA (Motif 8)

A C T G A C T G A C G T A C G T A C T G A C G T A G T C C G T A A G C T A T C G G T C A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A T G C C T G A A C G T A C T G T C G A A G T C T C G A T C G A A G T C A G T C
p-value:1e-14
log p-value:-3.323e+01
Information Content per bp:1.774
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets67.5 +/- 17.6bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GGTTGTCATGACA-
GGTTGCCATGGCAA
 A C T G A C T G A C G T A C G T A C T G A C G T A G T C C G T A A G C T A T C G G T C A A G T C C G T A A C G T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGTTGTCATGACA-
NGTTGCCATGGCAA
 A C T G A C T G A C G T A C G T A C T G A C G T A G T C C G T A A G C T A T C G G T C A A G T C C G T A A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:3
Score:0.69
Offset:6
Orientation:forward strand
Alignment:GGTTGTCATGACA
------CATGAC-
 A C T G A C T G A C G T A C G T A C T G A C G T A G T C C G T A A G C T A T C G G T C A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGTTGTCATGACA--
CGGTTGCCATGGCAAC
 A C G T A C T G A C T G A C G T A C G T A C T G A C G T A G T C C G T A A G C T A T C G G T C A A G T C C G T A A C G T A C G T
A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGTTGTCATGACA--
KGTTGCCATGGCAAC
 A C T G A C T G A C G T A C G T A C T G A C G T A G T C C G T A A G C T A T C G G T C A A G T C C G T A A C G T A C G T
A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GGTTGTCATGACA
NGTAGGTTGGCATNNN-
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C G T A G T C C G T A A G C T A T C G G T C A A G T C C G T A
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T

RFX2/MA0600.2/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGTTGTCATGACA---
CGTTGCCATGGCAACG
 A C T G A C T G A C G T A C G T A C T G A C G T A G T C C G T A A G C T A T C G G T C A A G T C C G T A A C G T A C G T A C G T
A T G C T C A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G

RFX3/MA0798.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGTTGTCATGACA---
CGTTGCCATGGCAACN
 A C T G A C T G A C G T A C G T A C T G A C G T A G T C C G T A A G C T A T C G G T C A A G T C C G T A A C G T A C G T A C G T
A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G

Rfx1/MA0509.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGTTGTCATGACA--
-GTTGCCATGGNAAC
 A C T G A C T G A C G T A C G T A C T G A C G T A G T C C G T A A G C T A T C G G T C A A G T C C G T A A C G T A C G T
A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

RFX4/MA0799.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGTTGTCATGACA---
CGTTGCCATGGCAACN
 A C T G A C T G A C G T A C G T A C T G A C G T A G T C C G T A A G C T A T C G G T C A A G T C C G T A A C G T A C G T A C G T
A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C G T A G A T C T A C G