Information for 11-TGACCCTRCACTCCTC (Motif 17)

A C G T A C T G C G T A A G T C A G T C A G T C A C G T C T A G G T A C C G T A A T G C C G A T A T G C A G T C C G A T A G T C
Reverse Opposite:
A C T G C G T A A C T G A T C G C G T A A T C G G A C T A C T G A G T C C G T A C T A G A C T G A C T G A C G T A G T C C G T A
p-value:1e-8
log p-value:-2.021e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.5 +/- 22.6bp
Average Position of motif in Background58.3 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.83
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0157.1_Rara_2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TGACCCTRCACTCCTC
NNCNTGACCCCGCTCT----
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T C T A G G T A C C G T A A T G C C G A T A T G C A G T C C G A T A G T C
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T A C G T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGACCCTRCACTCCTC
NNNNTGACCCGGCGCG----
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T C T A G G T A C C G T A A T G C C G A T A T G C A G T C C G A T A G T C
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGACCCTRCACTCCTC
GCTGACCTTGAACTN---
 A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T C T A G G T A C C G T A A T G C C G A T A T G C A G T C C G A T A G T C
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGACCCTRCACTCCTC
TGACCT----------
 A C G T A C T G C G T A A G T C A G T C A G T C A C G T C T A G G T A C C G T A A T G C C G A T A T G C A G T C C G A T A G T C
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TGACCCTRCACTCCTC
TGTCGTGACCCCTTAAT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T C T A G G T A C C G T A A T G C C G A T A T G C A G T C C G A T A G T C
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGACCCTRCACTCCTC
TGACCTTGACCT----
 A C G T A C T G C G T A A G T C A G T C A G T C A C G T C T A G G T A C C G T A A T G C C G A T A T G C A G T C C G A T A G T C
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGACCCTRCACTCCTC
ATGACCTTGAA------
 A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T C T A G G T A C C G T A A T G C C G A T A T G C A G T C C G A T A G T C
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGACCCTRCACTCCTC
TGACCYCT--------
 A C G T A C T G C G T A A G T C A G T C A G T C A C G T C T A G G T A C C G T A A T G C C G A T A T G C A G T C C G A T A G T C
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGACCCTRCACTCCTC
NTGACCTTGA-------
 A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T C T A G G T A C C G T A A T G C C G A T A T G C A G T C C G A T A G T C
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TGACCCTRCACTCCTC
NNANTTGACCCCTNNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T C T A G G T A C C G T A A T G C C G A T A T G C A G T C C G A T A G T C
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G A C G T A C G T A C G T A C G T