Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-90 | -2.082e+02 | 0.0000 | 145.0 | 18.83% | 932.6 | 2.04% | motif file (matrix) |
svg |
2 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-61 | -1.420e+02 | 0.0000 | 293.0 | 38.05% | 6339.8 | 13.85% | motif file (matrix) |
svg |
3 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-59 | -1.364e+02 | 0.0000 | 455.0 | 59.09% | 13988.8 | 30.57% | motif file (matrix) |
svg |
4 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-46 | -1.076e+02 | 0.0000 | 142.0 | 18.44% | 2000.7 | 4.37% | motif file (matrix) |
svg |
5 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-34 | -7.924e+01 | 0.0000 | 261.0 | 33.90% | 7224.6 | 15.79% | motif file (matrix) |
svg |
6 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-19 | -4.453e+01 | 0.0000 | 101.0 | 13.12% | 2152.4 | 4.70% | motif file (matrix) |
svg |
7 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-18 | -4.374e+01 | 0.0000 | 76.0 | 9.87% | 1336.6 | 2.92% | motif file (matrix) |
svg |
8 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-14 | -3.248e+01 | 0.0000 | 33.0 | 4.29% | 353.1 | 0.77% | motif file (matrix) |
svg |
9 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-11 | -2.752e+01 | 0.0000 | 30.0 | 3.90% | 350.4 | 0.77% | motif file (matrix) |
svg |
10 |
| Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer | 1e-11 | -2.559e+01 | 0.0000 | 33.0 | 4.29% | 457.3 | 1.00% | motif file (matrix) |
svg |
11 |
| RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer | 1e-9 | -2.290e+01 | 0.0000 | 15.0 | 1.95% | 92.7 | 0.20% | motif file (matrix) |
svg |
12 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-9 | -2.265e+01 | 0.0000 | 63.0 | 8.18% | 1526.5 | 3.34% | motif file (matrix) |
svg |
13 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-8 | -1.924e+01 | 0.0000 | 51.0 | 6.62% | 1209.9 | 2.64% | motif file (matrix) |
svg |
14 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-8 | -1.845e+01 | 0.0000 | 33.0 | 4.29% | 610.5 | 1.33% | motif file (matrix) |
svg |
15 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-7 | -1.732e+01 | 0.0000 | 239.0 | 31.04% | 10302.9 | 22.51% | motif file (matrix) |
svg |
16 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-7 | -1.718e+01 | 0.0000 | 62.0 | 8.05% | 1726.7 | 3.77% | motif file (matrix) |
svg |
17 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-7 | -1.663e+01 | 0.0000 | 32.0 | 4.16% | 627.4 | 1.37% | motif file (matrix) |
svg |
18 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-6 | -1.600e+01 | 0.0000 | 39.0 | 5.06% | 889.5 | 1.94% | motif file (matrix) |
svg |
19 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-6 | -1.547e+01 | 0.0000 | 54.0 | 7.01% | 1486.2 | 3.25% | motif file (matrix) |
svg |
20 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-6 | -1.544e+01 | 0.0000 | 53.0 | 6.88% | 1447.7 | 3.16% | motif file (matrix) |
svg |
21 |
| VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer | 1e-6 | -1.499e+01 | 0.0000 | 30.0 | 3.90% | 608.9 | 1.33% | motif file (matrix) |
svg |
22 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-6 | -1.410e+01 | 0.0000 | 218.0 | 28.31% | 9581.5 | 20.94% | motif file (matrix) |
svg |
23 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-5 | -1.249e+01 | 0.0001 | 43.0 | 5.58% | 1188.7 | 2.60% | motif file (matrix) |
svg |
24 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.183e+01 | 0.0001 | 52.0 | 6.75% | 1597.9 | 3.49% | motif file (matrix) |
svg |
25 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-5 | -1.160e+01 | 0.0001 | 123.0 | 15.97% | 4958.5 | 10.84% | motif file (matrix) |
svg |
26 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-4 | -1.145e+01 | 0.0001 | 22.0 | 2.86% | 444.6 | 0.97% | motif file (matrix) |
svg |
27 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-4 | -1.081e+01 | 0.0003 | 41.0 | 5.32% | 1192.7 | 2.61% | motif file (matrix) |
svg |
28 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-4 | -1.078e+01 | 0.0003 | 43.0 | 5.58% | 1278.0 | 2.79% | motif file (matrix) |
svg |
29 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-3 | -8.938e+00 | 0.0016 | 24.0 | 3.12% | 603.4 | 1.32% | motif file (matrix) |
svg |
30 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-3 | -8.794e+00 | 0.0018 | 24.0 | 3.12% | 609.6 | 1.33% | motif file (matrix) |
svg |
31 |
| FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer | 1e-3 | -8.011e+00 | 0.0039 | 42.0 | 5.45% | 1406.3 | 3.07% | motif file (matrix) |
svg |
32 |
| THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer | 1e-3 | -7.269e+00 | 0.0079 | 43.0 | 5.58% | 1506.7 | 3.29% | motif file (matrix) |
svg |
33 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-3 | -7.099e+00 | 0.0091 | 8.0 | 1.04% | 114.2 | 0.25% | motif file (matrix) |
svg |
34 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -7.076e+00 | 0.0091 | 29.0 | 3.77% | 898.6 | 1.96% | motif file (matrix) |
svg |
35 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-2 | -6.644e+00 | 0.0135 | 86.0 | 11.17% | 3669.7 | 8.02% | motif file (matrix) |
svg |
36 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-2 | -6.605e+00 | 0.0137 | 13.0 | 1.69% | 285.0 | 0.62% | motif file (matrix) |
svg |
37 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-2 | -6.369e+00 | 0.0169 | 130.0 | 16.88% | 6014.0 | 13.14% | motif file (matrix) |
svg |
38 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.348e+00 | 0.0169 | 24.0 | 3.12% | 728.6 | 1.59% | motif file (matrix) |
svg |
39 |
| Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer | 1e-2 | -5.812e+00 | 0.0279 | 29.0 | 3.77% | 980.7 | 2.14% | motif file (matrix) |
svg |
40 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.404e+00 | 0.0410 | 7.0 | 0.91% | 119.5 | 0.26% | motif file (matrix) |
svg |
41 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -5.223e+00 | 0.0479 | 33.0 | 4.29% | 1209.0 | 2.64% | motif file (matrix) |
svg |
42 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-2 | -4.881e+00 | 0.0658 | 230.0 | 29.87% | 11862.8 | 25.92% | motif file (matrix) |
svg |
43 |
| RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer | 1e-2 | -4.865e+00 | 0.0658 | 11.0 | 1.43% | 274.1 | 0.60% | motif file (matrix) |
svg |
44 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-2 | -4.815e+00 | 0.0671 | 11.0 | 1.43% | 276.5 | 0.60% | motif file (matrix) |
svg |