Information for 10-CTGAGGCACAGAT (Motif 17)

A G T C C A G T A C T G C G T A A C T G A C T G A G T C C G T A A G T C C G T A A C T G C G T A A C G T
Reverse Opposite:
G T C A A C G T A G T C A C G T A C T G A C G T A C T G A G T C A G T C A C G T A G T C G C T A C T A G
p-value:1e-5
log p-value:-1.315e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.0 +/- 24.8bp
Average Position of motif in Background77.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTGAGGCACAGAT----
-CGAAGCACACAAAATA
 A G T C C A G T A C T G C G T A A C T G A C T G A G T C C G T A A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGAGGCACAGAT
-CCAGGAACAG--
 A G T C C A G T A C T G C G T A A C T G A C T G A G T C C G T A A G T C C G T A A C T G C G T A A C G T
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGGCACAGAT
NATGAGTCACC---
 A C G T A G T C C A G T A C T G C G T A A C T G A C T G A G T C C G T A A G T C C G T A A C T G C G T A A C G T
A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGAGGCACAGAT
-TGAGTCA-----
 A G T C C A G T A C T G C G T A A C T G A C T G A G T C C G T A A G T C C G T A A C T G C G T A A C G T
A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTGAGGCACAGAT----
-AGCGGCACACACGCAA
 A G T C C A G T A C T G C G T A A C T G A C T G A G T C C G T A A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CTGAGGCACAGAT--
-----GCAGTGATTT
 A G T C C A G T A C T G C G T A A C T G A C T G A G T C C G T A A G T C C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTGAGGCACAGAT
AGCCTCAGGCA-----
 A C G T A C G T A C G T A G T C C A G T A C T G C G T A A C T G A C T G A G T C C G T A A G T C C G T A A C T G C G T A A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTGAGGCACAGAT
AGCCTCAGGCA-----
 A C G T A C G T A C G T A G T C C A G T A C T G C G T A A C T G A C T G A G T C C G T A A G T C C G T A A C T G C G T A A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTGAGGCACAGAT
TGCTGAGTCA-----
 A C G T A C G T A G T C C A G T A C T G C G T A A C T G A C T G A G T C C G T A A G T C C G T A A C T G C G T A A C G T
C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTGAGGCACAGAT
NTGATTGACAGN-
 A G T C C A G T A C T G C G T A A C T G A C T G A G T C C G T A A G T C C G T A A C T G C G T A A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T