Information for 9-CCCTGTTATGCTG (Motif 16)

A G T C A G T C G T A C A C G T A C T G A C G T A C G T C G T A A C G T A C T G A T G C A C G T A C T G
Reverse Opposite:
A G T C C G T A A T C G A G T C C G T A A C G T C G T A C G T A G T A C C G T A A C T G A C T G A C T G
p-value:1e-6
log p-value:-1.406e+01
Information Content per bp:1.924
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.8 +/- 25.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGTTATGCTG--
NNCTTTGTTTTGNTNNN
 A C G T A C G T A G T C A G T C G T A C A C G T A C T G A C G T A C G T C G T A A C G T A C T G A T G C A C G T A C T G A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGTTATGCTG-
GTNTTGTTGTGANNT
 A C G T A G T C A G T C G T A C A C G T A C T G A C G T A C G T C G T A A C G T A C T G A T G C A C G T A C T G A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCCTGTTATGCTG--
NNNTGTTGTTGTTNG
 A G T C A G T C G T A C A C G T A C T G A C G T A C G T C G T A A C G T A C T G A T G C A C G T A C T G A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PB0184.1_Tbp_2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCCTGTTATGCTG--
CCGATTTAAGCGACC
 A G T C A G T C G T A C A C G T A C T G A C G T A C G T C G T A A C G T A C T G A T G C A C G T A C T G A C G T A C G T
T G A C A T G C A T C G C G T A G A C T C G A T C G A T G T C A G C T A A T C G T A G C A C T G G C T A A C G T G T A C

TATA-Box(TBP)/Promoter/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCCTGTTATGCTG
-CCTTTTATAGNC
 A G T C A G T C G T A C A C G T A C T G A C G T A C G T C G T A A C G T A C T G A T G C A C G T A C T G
A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCCTGTTATGCTG--
----AATTTGCTGAC
 A G T C A G T C G T A C A C G T A C T G A C G T A C G T C G T A A C G T A C T G A T G C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

MAFK/MA0496.1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CCCTGTTATGCTG------
----AAANTGCTGACTNAG
 A G T C A G T C G T A C A C G T A C T G A C G T A C G T C G T A A C G T A C T G A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

TBP/MA0108.2/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CCCTGTTATGCTG
NNNNNNCTTTTATAN--
 A C G T A C G T A C G T A C G T A G T C A G T C G T A C A C G T A C T G A C G T A C G T C G T A A C G T A C T G A T G C A C G T A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CCCTGTTATGCTG
NNNNNNCTTTTATAN--
 A C G T A C G T A C G T A C G T A G T C A G T C G T A C A C G T A C T G A C G T A C G T C G T A A C G T A C T G A T G C A C G T A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCCTGTTATGCTG--
CTTTGTTATGCAAAT
 A G T C A G T C G T A C A C G T A C T G A C G T A C G T C G T A A C G T A C T G A T G C A C G T A C T G A C G T A C G T
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T