Information for 7-GCWGCGAGGT (Motif 11)

A T C G G T A C C G T A A C T G A G T C A C T G C G T A A C T G C T A G A C G T
Reverse Opposite:
C G T A A G T C A G T C A C G T A G T C A C T G G T A C C G A T A C T G A T G C
p-value:1e-9
log p-value:-2.090e+01
Information Content per bp:1.832
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif18.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets45.4 +/- 20.0bp
Average Position of motif in Background36.2 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCWGCGAGGT----
TTGACCGAGAATTCC
 A C G T A T C G G T A C C G T A A C T G A G T C A C T G C G T A A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

RORA/MA0071.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCWGCGAGGT--
--ATCAAGGTCA
 A T C G G T A C C G T A A C T G A G T C A C T G C G T A A C T G C T A G A C G T A C G T A C G T
A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A

PB0138.1_Irf4_2/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCWGCGAGGT----
GNNACCGAGAATNNN
 A C G T A T C G G T A C C G T A A C T G A G T C A C T G C G T A A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

PB0014.1_Esrra_1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCWGCGAGGT-------
TATTCAAGGTCATGCGA
 A T C G G T A C C G T A A C T G A G T C A C T G C G T A A C T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCWGCGAGGT---
---TCAAGGTCAN
 A T C G G T A C C G T A A C T G A G T C A C T G C G T A A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GCWGCGAGGT-
-ATGCCAGACN
 A T C G G T A C C G T A A C T G A G T C A C T G C G T A A C T G C T A G A C G T A C G T
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Esrra/MA0592.2/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GCWGCGAGGT---
--TTCAAGGTCAT
 A T C G G T A C C G T A A C T G A G T C A C T G C G T A A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GCWGCGAGGT----
---TCAAGGTCATA
 A T C G G T A C C G T A A C T G A G T C A C T G C G T A A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GCWGCGAGGT--
----AGRGGTCA
 A T C G G T A C C G T A A C T G A G T C A C T G C G T A A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCWGCGAGGT
--TGCGTG--
 A T C G G T A C C G T A A C T G A G T C A C T G C G T A A C T G C T A G A C G T
A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T