Information for 7-TTCATGTCCCTGGTGT (Motif 10)

C A G T A G C T G T A C G C T A C G A T A C T G C A G T A G T C G A T C G T A C A G C T C A T G A T C G C G A T T A C G A G C T
Reverse Opposite:
C T G A A G T C G C T A A T G C G A T C C T G A C A T G C A T G T C A G G T C A A G T C C G T A C G A T A C T G C T G A G C T A
p-value:1e-9
log p-value:-2.179e+01
Information Content per bp:1.671
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.8 +/- 28.5bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTCATGTCCCTGGTGT
--BNTGDCCTTG----
 C A G T A G C T G T A C G C T A C G A T A C T G C A G T A G T C G A T C G T A C A G C T C A T G A T C G C G A T T A C G A G C T
A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTCATGTCCCTGGTGT
---CTGTTCCTGG---
 C A G T A G C T G T A C G C T A C G A T A C T G C A G T A G T C G A T C G T A C A G C T C A T G A T C G C G A T T A C G A G C T
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TTCATGTCCCTGGTGT
----TGACCTTGAN--
 C A G T A G C T G T A C G C T A C G A T A C T G C A G T A G T C G A T C G T A C A G C T C A T G A T C G C G A T T A C G A G C T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TTCATGTCCCTGGTGT
----TGACCTTGAV--
 C A G T A G C T G T A C G C T A C G A T A C T G C A G T A G T C G A T C G T A C A G C T C A T G A T C G C G A T T A C G A G C T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TTCATGTCCCTGGTGT----
GGCGCTGTCCATGGTGCTGAA
 A C G T C A G T A G C T G T A C G C T A C G A T A C T G C A G T A G T C G A T C G T A C A G C T C A T G A T C G C G A T T A C G A G C T A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TTCATGTCCCTGGTGT
---CTGACCTTTG---
 C A G T A G C T G T A C G C T A C G A T A C T G C A G T A G T C G A T C G T A C A G C T C A T G A T C G C G A T T A C G A G C T
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:7
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---TTCATGTCCCTGGTGT
ACATTCATGACACG-----
 A C G T A C G T A C G T C A G T A G C T G T A C G C T A C G A T A C T G C A G T A G T C G A T C G T A C A G C T C A T G A T C G C G A T T A C G A G C T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TTCATGTCCCTGGTGT-
--GCTGACCTTGAACTN
 C A G T A G C T G T A C G C T A C G A T A C T G C A G T A G T C G A T C G T A C A G C T C A T G A T C G C G A T T A C G A G C T A C G T
A C G T A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TTCATGTCCCTGGTGT---
GGAGCTGTCCATGGTGCTGA
 A C G T C A G T A G C T G T A C G C T A C G A T A C T G C A G T A G T C G A T C G T A C A G C T C A T G A T C G C G A T T A C G A G C T A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--TTCATGTCCCTGGTGT
ATTTCCTGTN--------
 A C G T A C G T C A G T A G C T G T A C G C T A C G A T A C T G C A G T A G T C G A T C G T A C A G C T C A T G A T C G C G A T T A C G A G C T
C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T