Information for 6-ATTTTTAAAA (Motif 7)

G T C A A G C T G A C T A C G T G C A T A G C T T C G A G C T A C G T A T G C A
Reverse Opposite:
A C G T G C A T C G A T A G C T C T G A C G T A T G C A C T G A T C G A C A G T
p-value:1e-5
log p-value:-1.287e+01
Information Content per bp:1.650
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif5.08%
Number of Background Sequences with motif1112.7
Percentage of Background Sequences with motif2.32%
Average Position of motif in Targets55.4 +/- 31.4bp
Average Position of motif in Background50.9 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ATTTTTAAAA
CGGTTTCAAA-
 A C G T G T C A A G C T G A C T A C G T G C A T A G C T T C G A G C T A C G T A T G C A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----ATTTTTAAAA-
TTCTATTTTTAGNNN
 A C G T A C G T A C G T A C G T G T C A A G C T G A C T A C G T G C A T A G C T T C G A G C T A C G T A T G C A A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

PB0187.1_Tcf7_2/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ATTTTTAAAA---
NNNTTTNTAATACNG
 A C G T A C G T G T C A A G C T G A C T A C G T G C A T A G C T T C G A G C T A C G T A T G C A A C G T A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ATTTTTAAAA
-NATTCAAAT
 G T C A A G C T G A C T A C G T G C A T A G C T T C G A G C T A C G T A T G C A
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATTTTTAAAA
KCTATTTTTRGH-
 A C G T A C G T A C G T G T C A A G C T G A C T A C G T G C A T A G C T T C G A G C T A C G T A T G C A
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATTTTTAAAA
TCTATTTTTAGA-
 A C G T A C G T A C G T G T C A A G C T G A C T A C G T G C A T A G C T T C G A G C T A C G T A T G C A
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ATTTTTAAAA---
ANATTTTTGCAANTN
 A C G T A C G T G T C A A G C T G A C T A C G T G C A T A G C T T C G A G C T A C G T A T G C A A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PB0080.1_Tbp_1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATTTTTAAAA---
TCTTTATATATAAATA
 A C G T A C G T A C G T G T C A A G C T G A C T A C G T G C A T A G C T T C G A G C T A C G T A T G C A A C G T A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

PB0129.1_Glis2_2/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATTTTTAAAA-
AATATTAATAAAGA
 A C G T A C G T A C G T G T C A A G C T G A C T A C G T G C A T A G C T T C G A G C T A C G T A T G C A A C G T
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATTTTTAAAA
GCTATTTTTAGC-
 A C G T A C G T A C G T G T C A A G C T G A C T A C G T G C A T A G C T T C G A G C T A C G T A T G C A
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C A C G T