Information for 4-CTAGAGCACAGGTACC (Motif 3)

A T G C A C G T C G T A A C T G C T G A A C T G A T G C C G T A A G T C C G T A A C T G T C A G C G A T C G T A G T A C A G T C
Reverse Opposite:
A C T G A C T G C G A T C G T A A G T C G T A C A C G T A C T G A C G T A T C G G T A C A G C T G T A C G C A T C G T A T A C G
p-value:1e-11
log p-value:-2.668e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.2 +/- 31.8bp
Average Position of motif in Background49.8 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PPARG/MA0066.1/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTAGAGCACAGGTACC----
GTAGGTCACGGTGACCTACT
 A T G C A C G T C G T A A C T G C T G A A C T G A T G C C G T A A G T C C G T A A C T G T C A G C G A T C G T A G T A C A G T C A C G T A C G T A C G T A C G T
A T C G C G A T C T G A A T C G C A T G A C G T T A G C G C T A G T A C A T C G C A T G C A G T T A C G G T C A G T A C A G T C G A C T G T C A A T G C C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CTAGAGCACAGGTACC
------CACAGN----
 A T G C A C G T C G T A A C T G C T G A A C T G A T G C C G T A A G T C C G T A A C T G T C A G C G A T C G T A G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CTAGAGCACAGGTACC-
-------VCAGGTRDRY
 A T G C A C G T C G T A A C T G C T G A A C T G A T G C C G T A A G T C C G T A A C T G T C A G C G A T C G T A G T A C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTAGAGCACAGGTACC
GTAGGGCAAAGGTCA-
 A T G C A C G T C G T A A C T G C T G A A C T G A T G C C G T A A G T C C G T A A C T G T C A G C G A T C G T A G T A C A G T C
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTAGAGCACAGGTACC
-TAGGGCAAAGGTCA-
 A T G C A C G T C G T A A C T G C T G A A C T G A T G C C G T A A G T C C G T A A C T G T C A G C G A T C G T A G T A C A G T C
A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTAGAGCACAGGTACC
NANAGATCAAAGGGNNN
 A C G T A T G C A C G T C G T A A C T G C T G A A C T G A T G C C G T A A G T C C G T A A C T G T C A G C G A T C G T A G T A C A G T C
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CTAGAGCACAGGTACC
GRTGMTRGAGCC--------
 A C G T A C G T A C G T A C G T A T G C A C G T C G T A A C T G C T G A A C T G A T G C C G T A A G T C C G T A A C T G T C A G C G A T C G T A G T A C A G T C
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTAGAGCACAGGTACC
--AAACCACAGC----
 A T G C A C G T C G T A A C T G C T G A A C T G A T G C C G T A A G T C C G T A A C T G T C A G C G A T C G T A G T A C A G T C
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTAGAGCACAGGTACC
NNNAGATCAAAGGANNN
 A C G T A T G C A C G T C G T A A C T G C T G A A C T G A T G C C G T A A G T C C G T A A C T G T C A G C G A T C G T A G T A C A G T C
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CTAGAGCACAGGTACC
-TGGGGCAAAGGTCA-
 A T G C A C G T C G T A A C T G C T G A A C T G A T G C C G T A A G T C C G T A A C T G T C A G C G A T C G T A G T A C A G T C
A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T