Information for 14-YGTTCTKCTATCA (Motif 19)

A G C T A C T G A C G T A C G T A G T C C G A T A C T G G T A C A G C T C T G A A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G G T C A A G C T C T G A A C T G G T A C C G T A A C T G C G T A C G T A A G T C C T G A
p-value:1e-9
log p-value:-2.227e+01
Information Content per bp:1.911
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.8 +/- 18.4bp
Average Position of motif in Background77.1 +/- 7.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----YGTTCTKCTATCA
GTNTTGTTGTGANNT--
 A C G T A C G T A C G T A C G T A G C T A C T G A C G T A C G T A G T C C G A T A C T G G T A C A G C T C T G A A C G T A G T C C G T A
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T A C G T A C G T

PH0161.1_Six1/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:forward strand
Alignment:YGTTCTKCTATCA-----
-GATGGGGTATCATTTTT
 A G C T A C T G A C G T A C G T A G T C C G A T A C T G G T A C A G C T C T G A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.54
Offset:6
Orientation:forward strand
Alignment:YGTTCTKCTATCA-
------CCAATCAA
 A G C T A C T G A C G T A C G T A G T C C G A T A C T G G T A C A G C T C T G A A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

GATA5/MA0766.1/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:YGTTCTKCTATCA
-----TCTTATCT
 A G C T A C T G A C G T A C G T A G T C C G A T A C T G G T A C A G C T C T G A A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:YGTTCTKCTATCA-
------GCTGTCAA
 A G C T A C T G A C G T A C G T A G T C C G A T A C T G G T A C A G C T C T G A A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

PH0166.1_Six6_2/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:YGTTCTKCTATCA-----
-AATAGGGTATCAATATT
 A G C T A C T G A C G T A C G T A G T C C G A T A C T G G T A C A G C T C T G A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:YGTTCTKCTATCA
---TCATCAATCA
 A G C T A C T G A C G T A C G T A G T C C G A T A C T G G T A C A G C T C T G A A C G T A G T C C G T A
A C G T A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A

PB0022.1_Gata5_1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:YGTTCTKCTATCA-----
-NTNTTCTTATCAGTNTN
 A G C T A C T G A C G T A C G T A G T C C G A T A C T G G T A C A G C T C T G A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:YGTTCTKCTATCA-
--GYCATCMATCAT
 A G C T A C T G A C G T A C G T A G T C C G A T A C T G G T A C A G C T C T G A A C G T A G T C C G T A A C G T
A C G T A C G T T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:YGTTCTKCTATCA
-----YSTTATCT
 A G C T A C T G A C G T A C G T A G T C C G A T A C T G G T A C A G C T C T G A A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T