Information for 10-GRGYTGTGGCAGTGGA (Motif 8)

A T C G T C A G A C T G G A C T A G C T A C T G A G C T A C T G A C T G A T G C C G T A A C T G C G A T C T A G A T C G C T G A
Reverse Opposite:
G A C T A T G C A G T C C G T A A G T C A C G T A T C G G T A C A G T C C T G A T G A C C T G A C T G A T A G C A G T C A T G C
p-value:1e-14
log p-value:-3.287e+01
Information Content per bp:1.721
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.7 +/- 18.8bp
Average Position of motif in Background62.4 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myb/MA0100.2/Jaspar

Match Rank:1
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GRGYTGTGGCAGTGGA
------TGGCAGTTGN
 A T C G T C A G A C T G G A C T A G C T A C T G A G C T A C T G A C T G A T G C C G T A A C T G C G A T C T A G A T C G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GRGYTGTGGCAGTGGA
----CTTGGCAA----
 A T C G T C A G A C T G G A C T A G C T A C T G A G C T A C T G A C T G A T G C C G T A A C T G C G A T C T A G A T C G C T G A
A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GRGYTGTGGCAGTGGA---
---NNNTGGCAGTTGGTNN
 A T C G T C A G A C T G G A C T A G C T A C T G A G C T A C T G A C T G A T G C C G T A A C T G C G A T C T A G A T C G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GRGYTGTGGCAGTGGA
---NNTTGGCANN---
 A T C G T C A G A C T G G A C T A G C T A C T G A G C T A C T G A C T G A T G C C G T A A C T G C G A T C T A G A T C G C T G A
A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GRGYTGTGGCAGTGGA
----NTTGGCANN---
 A T C G T C A G A C T G G A C T A G C T A C T G A G C T A C T G A C T G A T G C C G T A A C T G C G A T C T A G A T C G C T G A
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GRGYTGTGGCAGTGGA
-----TTGGCA-----
 A T C G T C A G A C T G G A C T A G C T A C T G A G C T A C T G A C T G A T G C C G T A A C T G C G A T C T A G A T C G C T G A
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GRGYTGTGGCAGTGGA
TGGGTGTGGC------
 A T C G T C A G A C T G G A C T A G C T A C T G A G C T A C T G A C T G A T G C C G T A A C T G C G A T C T A G A T C G C T G A
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GRGYTGTGGCAGTGGA
------TGGCAGTTGG
 A T C G T C A G A C T G G A C T A G C T A C T G A G C T A C T G A C T G A T G C C G T A A C T G C G A T C T A G A T C G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GRGYTGTGGCAGTGGA
---GTGGGGGAGGGG-
 A T C G T C A G A C T G G A C T A G C T A C T G A G C T A C T G A C T G A T G C C G T A A C T G C G A T C T A G A T C G C T G A
A C G T A C G T A C G T C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T

INSM1/MA0155.1/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GRGYTGTGGCAGTGGA--
------TGTCAGGGGGCG
 A T C G T C A G A C T G G A C T A G C T A C T G A G C T A C T G A C T G A T G C C G T A A C T G C G A T C T A G A T C G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G