Information for 22-AGAGCCTGCGGAT (Motif 28)

C G T A C T A G C G T A A C T G A G T C A G T C A C G T A C T G A G T C C T A G A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C G T A G T C A C G T
p-value:1e-7
log p-value:-1.709e+01
Information Content per bp:1.951
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.0 +/- 34.4bp
Average Position of motif in Background45.4 +/- 6.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGAGCCTGCGGAT
-GCGCCTGCGCA-
 C G T A C T A G C G T A A C T G A G T C A G T C A C G T A C T G A G T C C T A G A C T G C G T A A C G T
A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGAGCCTGCGGAT
--TGCCTGAGGCN
 C G T A C T A G C G T A A C T G A G T C A G T C A C G T A C T G A G T C C T A G A C T G C G T A A C G T
A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AGAGCCTGCGGAT-
----CCTGCTGAGH
 C G T A C T A G C G T A A C T G A G T C A G T C A C G T A C T G A G T C C T A G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGAGCCTGCGGAT--
ANTGCCTGAGGCAAN
 C G T A C T A G C G T A A C T G A G T C A G T C A C G T A C T G A G T C C T A G A C T G C G T A A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

TFAP2A/MA0003.3/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGAGCCTGCGGAT
--NGCCTGAGGCN
 C G T A C T A G C G T A A C T G A G T C A G T C A C G T A C T G A G T C C T A G A C T G C G T A A C G T
A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGAGCCTGCGGAT
--NGCCTNAGGCN
 C G T A C T A G C G T A A C T G A G T C A G T C A C G T A C T G A G T C C T A G A C T G C G T A A C G T
A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGAGCCTGCGGAT--
ATTGCCTGAGGCAAT
 C G T A C T A G C G T A A C T G A G T C A G T C A C G T A C T G A G T C C T A G A C T G C G T A A C G T A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGAGCCTGCGGAT
AGAGRRACAGCWGAC
 A C G T A C G T C G T A C T A G C G T A A C T G A G T C A G T C A C G T A C T G A G T C C T A G A C T G C G T A A C G T
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGAGCCTGCGGAT
-GCGCATGCGCAG
 C G T A C T A G C G T A A C T G A G T C A G T C A C G T A C T G A G T C C T A G A C T G C G T A A C G T
A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

PB0077.1_Spdef_1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGAGCCTGCGGAT----
-GTACATCCGGATTTTT
 C G T A C T A G C G T A A C T G A G T C A G T C A C G T A C T G A G T C C T A G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T