Information for 12-GTGGTTKCTGTGG (Motif 19)

A T C G A C G T A C T G A C T G C G A T A C G T A C T G A G T C A G C T A T C G C G A T A C T G C T A G
Reverse Opposite:
A G T C A G T C C G T A A T G C C T G A T C A G T G A C G T C A C G T A G T A C A G T C C G T A A T G C
p-value:1e-9
log p-value:-2.087e+01
Information Content per bp:1.815
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif65.9
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets59.2 +/- 24.1bp
Average Position of motif in Background53.3 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTTKCTGTGG
NNTGTGGTTT------
 A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G A T A C G T A C T G A G T C A G C T A T C G C G A T A C T G C T A G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGGTTKCTGTGG--
NNCGTTGCTATGGNN
 A T C G A C G T A C T G A C T G C G A T A C G T A C T G A G T C A G C T A T C G C G A T A C T G C T A G A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTGGTTKCTGTGG--
NNTGTTTATTTTGGCA
 A C G T A T C G A C G T A C T G A C T G C G A T A C G T A C T G A G T C A G C T A T C G C G A T A C T G C T A G A C G T A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GTGGTTKCTGTGG---
-----GTCTGTGGTTT
 A T C G A C G T A C T G A C T G C G A T A C G T A C T G A G T C A G C T A T C G C G A T A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTTKCTGTGG
CTGTGGTTTN-----
 A C G T A C G T A T C G A C G T A C T G A C T G C G A T A C G T A C T G A G T C A G C T A T C G C G A T A C T G C T A G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GTGGTTKCTGTGG------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G A T A C G T A C T G A G T C A G C T A T C G C G A T A C T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

Rfx1/MA0509.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GTGGTTKCTGTGG----
---GTTGCCATGGNAAC
 A T C G A C G T A C T G A C T G C G A T A C G T A C T G A G T C A G C T A T C G C G A T A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTGGTTKCTGTGG---
NSTGTTTRCWCAGBNNN
 A C G T A T C G A C G T A C T G A C T G C G A T A C G T A C T G A G T C A G C T A T C G C G A T A C T G C T A G A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTGGTTKCTGTGG
GCTGTGGTTT------
 A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G A T A C G T A C T G A G T C A G C T A T C G C G A T A C T G C T A G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GTGGTTKCTGTGG----
-----NNHTGTGGTTWN
 A T C G A C G T A C T G A C T G C G A T A C G T A C T G A G T C A G C T A T C G C G A T A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G