Information for 8-CAACCTTAATAAG (Motif 9)

A G T C C G T A C T G A G T A C G A T C G C A T G C A T C G T A C T G A A C G T C T G A C T G A T A C G
Reverse Opposite:
A T G C G A C T A G C T T G C A A G C T C G A T C G T A C G T A C T A G C A T G G A C T C G A T T C A G
p-value:1e-10
log p-value:-2.342e+01
Information Content per bp:1.740
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif34.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets35.4 +/- 23.7bp
Average Position of motif in Background44.7 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX6-1/MA0674.1/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CAACCTTAATAAG
-----TTAATTAN
 A G T C C G T A C T G A G T A C G A T C G C A T G C A T C G T A C T G A A C G T C T G A C T G A T A C G
A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAACCTTAATAAG-----
-GACGATAATGAGCTTGC
 A G T C C G T A C T G A G T A C G A T C G C A T G C A T C G T A C T G A A C G T C T G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T
A C G T T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

Arid3b/MA0601.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CAACCTTAATAAG
--ATATTAATTAA
 A G T C C G T A C T G A G T A C G A T C G C A T G C A T C G T A C T G A A C G T C T G A C T G A T A C G
A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

LBX1/MA0618.1/Jaspar

Match Rank:4
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CAACCTTAATAAG
-----TTAATTAG
 A G T C C G T A C T G A G T A C G A T C G C A T G C A T C G T A C T G A A C G T C T G A C T G A T A C G
A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G

NKX6-2/MA0675.1/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CAACCTTAATAAG
-----TTAATTAN
 A G T C C G T A C T G A G T A C G A T C G C A T G C A T C G T A C T G A A C G T C T G A C T G A T A C G
A C G T A C G T A C G T A C G T A C G T C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G

POU6F2/MA0793.1/Jaspar

Match Rank:6
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CAACCTTAATAAG--
-----NTAATGAGCT
 A G T C C G T A C T G A G T A C G A T C G C A T G C A T C G T A C T G A A C G T C T G A C T G A T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

GSX2/MA0893.1/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CAACCTTAATAAG-
----NTTAATTAGN
 A G T C C G T A C T G A G T A C G A T C G C A T G C A T C G T A C T G A A C G T C T G A C T G A T A C G A C G T
A C G T A C G T A C G T A C G T C A G T A G C T C G A T C G T A C G T A G C A T C A G T C T G A T A C G C A G T

GSX1/MA0892.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CAACCTTAATAAG-
----NNTAATTAGN
 A G T C C G T A C T G A G T A C G A T C G C A T G C A T C G T A C T G A A C G T C T G A C T G A T A C G A C G T
A C G T A C G T A C G T A C G T C G A T A G C T G C A T C G T A C G T A A G C T C A G T C T G A T A C G C A T G

PH0159.1_Rhox6/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAACCTTAATAAG-----
-TGCCTTAATTAATGCTC
 A G T C C G T A C T G A G T A C G A T C G C A T G C A T C G T A C T G A A C G T C T G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T C A G G T A C T G A C G A C T G A C T G C T A T C G A A C G T C G A T C G T A C T G A A G C T A C T G A T G C C G A T G A T C

EMX1/MA0612.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CAACCTTAATAAG-
----CCTAATTACC
 A G T C C G T A C T G A G T A C G A T C G C A T G C A T C G T A C T G A A C G T C T G A C T G A T A C G A C G T
A C G T A C G T A C G T A C G T T G A C A G T C G A C T T C G A C G T A C G A T C A G T C T G A T A G C A G T C