Information for 6-TGACTGACTCCCG (Motif 10)

A C G T A C T G G C T A A G T C A C G T A C T G T C G A A G T C A G C T A G T C A G T C A G T C C T A G
Reverse Opposite:
A G T C A C T G A C T G A C T G C T G A A C T G A G C T A G T C C G T A A C T G C G A T A G T C C G T A
p-value:1e-9
log p-value:-2.228e+01
Information Content per bp:1.929
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.3 +/- 22.9bp
Average Position of motif in Background64.1 +/- 12.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGACTGACTCCCG
CTGTCTGTCACCT-
 A C G T A C G T A C T G G C T A A G T C A C G T A C T G T C G A A G T C A G C T A G T C A G T C A G T C C T A G
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGACTGACTCCCG
TGTCTGDCACCT-
 A C G T A C T G G C T A A G T C A C G T A C T G T C G A A G T C A G C T A G T C A G T C A G T C C T A G
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGACTGACTCCCG
BTGABTGACAGS--
 A C G T A C G T A C T G G C T A A G T C A C G T A C T G T C G A A G T C A G C T A G T C A G T C A G T C C T A G
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGACTGACTCCCG
TGAGTGACAGSC-
 A C G T A C T G G C T A A G T C A C G T A C T G T C G A A G T C A G C T A G T C A G T C A G T C C T A G
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGACTGACTCCCG
NTGATTGACAGN--
 A C G T A C G T A C T G G C T A A G T C A C G T A C T G T C G A A G T C A G C T A G T C A G T C A G T C C T A G
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGACTGACTCCCG----
TACGAGACTCCTCTAAC
 A C G T A C T G G C T A A G T C A C G T A C T G T C G A A G T C A G C T A G T C A G T C A G T C C T A G A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

FOS::JUN/MA0099.2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGACTGACTCCCG
TGACTCA------
 A C G T A C T G G C T A A G T C A C G T A C T G T C G A A G T C A G C T A G T C A G T C A G T C C T A G
A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGACTGACTCCCG---
ATAAATGACACCTATCA
 A C G T A C G T A C T G G C T A A G T C A C G T A C T G T C G A A G T C A G C T A G T C A G T C A G T C C T A G A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGACTGACTCCCG-----
---ACCACTCTCGGTCAC
 A C G T A C T G G C T A A G T C A C G T A C T G T C G A A G T C A G C T A G T C A G T C A G T C C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGACTGACTCCCG
NATGASTCABNN---
 A C G T A C G T A C G T A C T G G C T A A G T C A C G T A C T G T C G A A G T C A G C T A G T C A G T C A G T C C T A G
C T A G T C G A C G A T A C T G C G T A T A C G A G C T T G A C G C T A A C G T G A T C T A G C A C G T A C G T A C G T