p-value: | 1e-3 |
log p-value: | -7.900e+00 |
Information Content per bp: | 1.690 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 7.87% |
Number of Background Sequences with motif | 713.8 |
Percentage of Background Sequences with motif | 1.48% |
Average Position of motif in Targets | 46.4 +/- 22.2bp |
Average Position of motif in Background | 51.6 +/- 31.2bp |
Strand Bias (log2 ratio + to - strand density) | 0.7 |
Multiplicity (# of sites on avg that occur together) | 1.14 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GSCHGSCWGGCTG TGGCAGNCTGCCAG |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 2 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GSCHGSCWGGCTG- GTCATGCHTGRCTGS |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GSCHGSCWGGCTG --CTGTCTGG--- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GSCHGSCWGGCTG VBSYGTCTGG--- |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GSCHGSCWGGCTG AGGTGNCAGACAG |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 6 |
Score: | 0.56 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | GSCHGSCWGGCTG- ------TWGTCTGV |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 7 |
Score: | 0.53 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GSCHGSCWGGCTG ---GGTCTGGCAT |
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PB0151.1_Myf6_2/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GSCHGSCWGGCTG- GGNGCGNCTGTTNNN |
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NFIX/MA0671.1/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GSCHGSCWGGCTG- -----NTTGGCANN |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 10 |
Score: | 0.53 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GSCHGSCWGGCTG -----CTTGGCAA |
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