Information for 7-AGAAKAAAACAGT (Motif 6)

C G T A A C T G C G T A C T G A C A G T C G T A C G T A C G T A C G T A G T A C C G T A A T C G C G A T
Reverse Opposite:
C G T A A T G C A C G T A C T G A C G T C G A T A C G T A C G T G T C A A G C T A C G T T A G C A C G T
p-value:1e-11
log p-value:-2.616e+01
Information Content per bp:1.836
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets71.2 +/- 20.9bp
Average Position of motif in Background27.1 +/- 2.8bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0148.1_Mtf1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGAAKAAAACAGT
AAATAAGAAAAAAC-
 A C G T A C G T C G T A A C T G C G T A C T G A C A G T C G T A C G T A C G T A C G T A G T A C C G T A A T C G C G A T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGAAKAAAACAGT-
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T C G T A A C T G C G T A C T G A C A G T C G T A C G T A C G T A C G T A G T A C C G T A A T C G C G A T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGAAKAAAACAGT-
--AAACAAACATTC
 C G T A A C T G C G T A C T G A C A G T C G T A C G T A C G T A C G T A G T A C C G T A A T C G C G A T A C G T
A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

FOXP1/MA0481.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGAAKAAAACAGT-
CAAAAGTAAACAAAG
 A C G T C G T A A C T G C G T A C T G A C A G T C G T A C G T A C G T A C G T A G T A C C G T A A T C G C G A T A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

PH0075.1_Hoxd10/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGAAKAAAACAGT-
AATGCAATAAAATTTAT
 A C G T A C G T A C G T C G T A A C T G C G T A C T G A C A G T C G T A C G T A C G T A C G T A G T A C C G T A A T C G C G A T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

FOXP2/MA0593.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGAAKAAAACAGT
--AAGTAAACAAA
 C G T A A C T G C G T A C T G A C A G T C G T A C G T A C G T A C G T A G T A C C G T A A T C G C G A T
A C G T A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGAAKAAAACAGT
--AAATAAACA--
 C G T A A C T G C G T A C T G A C A G T C G T A C G T A C G T A C G T A G T A C C G T A A T C G C G A T
A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGAAKAAAACAGT---
AACACCAAAACAAAGGA
 A C G T C G T A A C T G C G T A C T G A C A G T C G T A C G T A C G T A C G T A G T A C C G T A A T C G C G A T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGAAKAAAACAGT
CCAATAAAAA---
 C G T A A C T G C G T A C T G A C A G T C G T A C G T A C G T A C G T A G T A C C G T A A T C G C G A T
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGAAKAAAACAGT---
ATATCAAAACAAAACA
 C G T A A C T G C G T A C T G A C A G T C G T A C G T A C G T A C G T A G T A C C G T A A T C G C G A T A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A