Information for 5-TGKGRWRWRTTAC (Motif 7)

A C G T A C T G A C T G C T A G C T A G C G A T C T A G C G T A T C A G A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G T A A G T C C G A T A G T C C G T A A G T C A G T C G T A C A G T C C G T A
p-value:1e-7
log p-value:-1.706e+01
Information Content per bp:1.815
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.3 +/- 27.5bp
Average Position of motif in Background37.5 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TGKGRWRWRTTAC
TATTATGGGATGGATAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T A G C T A G C G A T C T A G C G T A T C A G A C G T A C G T C G T A A G T C
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A A C G T

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:2
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TGKGRWRWRTTAC
ACATCTGGWWTYAATTAR
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T A G C T A G C G A T C T A G C G T A T C A G A C G T A C G T C G T A A G T C
T G C A G T A C C G T A A C G T T G A C C G A T A C T G A C T G C G A T C G A T G C A T A G C T G C T A C T G A A C G T G A C T G C T A C T G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TGKGRWRWRTTAC
NNHTGTGGTTWN----
 A C G T A C G T A C G T A C G T A C T G A C T G C T A G C T A G C G A T C T A G C G T A T C A G A C G T A C G T C G T A A G T C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGKGRWRWRTTAC
CSTGGGAAAD-----
 A C G T A C G T A C G T A C T G A C T G C T A G C T A G C G A T C T A G C G T A T C A G A C G T A C G T C G T A A G T C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:5
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TGKGRWRWRTTAC----
------ANGTTACATAA
 A C G T A C T G A C T G C T A G C T A G C G A T C T A G C G T A T C A G A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGKGRWRWRTTAC
-GKMTCADRTTWC
 A C G T A C T G A C T G C T A G C T A G C G A T C T A G C G T A T C A G A C G T A C G T C G T A A G T C
A C G T C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TGKGRWRWRTTAC
GCTGTGGTTT-----
 A C G T A C G T A C G T A C T G A C T G C T A G C T A G C G A T C T A G C G T A T C A G A C G T A C G T C G T A A G T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

PH0061.1_Hoxb6/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TGKGRWRWRTTAC---
TATTGGTAATTACCTT
 A C G T A C T G A C T G C T A G C T A G C G A T C T A G C G T A T C A G A C G T A C G T C G T A A G T C A C G T A C G T A C G T
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TGKGRWRWRTTAC
CTGTGGTTTN----
 A C G T A C G T A C T G A C T G C T A G C T A G C G A T C T A G C G T A T C A G A C G T A C G T C G T A A G T C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:10
Score:0.50
Offset:8
Orientation:forward strand
Alignment:TGKGRWRWRTTAC----
--------ATTGCATAA
 A C G T A C T G A C T G C T A G C T A G C G A T C T A G C G T A T C A G A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A