Information for 2-CTGGCCCTGGGGRAAC (Motif 3)

G T A C A C G T A C T G A C T G G T A C A T G C T G A C C G A T A C T G A T C G C T A G C T A G T C A G G T C A C T G A A G T C
Reverse Opposite:
C T A G A G C T A C G T A G C T A G T C A G T C A T G C A G T C C G T A A C T G A T C G C A T G A G T C A G T C C G T A A C T G
p-value:1e-11
log p-value:-2.538e+01
Information Content per bp:1.717
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif8.00%
Number of Background Sequences with motif29.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets59.0 +/- 26.4bp
Average Position of motif in Background49.4 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:1
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTGGCCCTGGGGRAAC
--TGCCCNGGGGCA--
 G T A C A C G T A C T G A C T G G T A C A T G C T G A C C G A T A C T G A T C G C T A G C T A G T C A G G T C A C T G A A G T C
A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTGGCCCTGGGGRAAC
-GTCCCCAGGGGA---
 G T A C A C G T A C T G A C T G G T A C A T G C T G A C C G A T A C T G A T C G C T A G C T A G T C A G G T C A C T G A A G T C
A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTGGCCCTGGGGRAAC
--TGCCCTNGGGCA--
 G T A C A C G T A C T G A C T G G T A C A T G C T G A C C G A T A C T G A T C G C T A G C T A G T C A G G T C A C T G A A G T C
A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTGGCCCTGGGGRAAC
-TTGCCCTAGGGCAT-
 G T A C A C G T A C T G A C T G G T A C A T G C T G A C C G A T A C T G A T C G C T A G C T A G T C A G G T C A C T G A A G T C
A C G T C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTGGCCCTGGGGRAAC
--TGCCCTNGGGCA--
 G T A C A C G T A C T G A C T G G T A C A T G C T G A C C G A T A C T G A T C G C T A G C T A G T C A G G T C A C T G A A G T C
A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTGGCCCTGGGGRAAC--
-ANTNCCGGGGGGAANTT
 G T A C A C G T A C T G A C T G G T A C A T G C T G A C C G A T A C T G A T C G C T A G C T A G T C A G G T C A C T G A A G T C A C G T A C G T
A C G T C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTGGCCCTGGGGRAAC
-ATGCCCTGAGGC---
 G T A C A C G T A C T G A C T G G T A C A T G C T G A C C G A T A C T G A T C G C T A G C T A G T C A G G T C A C T G A A G T C
A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:8
Score:0.51
Offset:7
Orientation:forward strand
Alignment:CTGGCCCTGGGGRAAC
-------AGAGGAA--
 G T A C A C G T A C T G A C T G G T A C A T G C T G A C C G A T A C T G A T C G C T A G C T A G T C A G G T C A C T G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.51
Offset:7
Orientation:forward strand
Alignment:CTGGCCCTGGGGRAAC
-------TGGGGA---
 G T A C A C G T A C T G A C T G G T A C A T G C T G A C C G A T A C T G A T C G C T A G C T A G T C A G G T C A C T G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CTGGCCCTGGGGRAAC
-NTGCCCANNGGTNA-
 G T A C A C G T A C T G A C T G G T A C A T G C T G A C C G A T A C T G A T C G C T A G C T A G T C A G G T C A C T G A A G T C
A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T