Information for 5-CCHCAACBACHCGDCC (Motif 9)

A G T C A G T C G C T A A T G C C T G A C T G A A G T C A G T C G T C A G T A C G C T A A G T C A T C G C A G T G T A C G T A C
Reverse Opposite:
A C T G A C T G G C T A A T G C A C T G C A G T A C T G A C G T T A C G C T A G A G C T A G C T A T C G C A G T A C T G A C T G
p-value:1e-7
log p-value:-1.796e+01
Information Content per bp:1.692
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif23.53%
Number of Background Sequences with motif75.9
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets41.2 +/- 34.7bp
Average Position of motif in Background44.3 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCHCAACBACHCGDCC
GCCACRCCCACY-----
 A C G T A G T C A G T C G C T A A T G C C T G A C T G A A G T C A G T C G T C A G T A C G C T A A G T C A T C G C A G T G T A C G T A C
T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T A C G T A C G T A C G T A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCHCAACBACHCGDCC---
CCCCAAACCACCCCCCCCCA
 A C G T A G T C A G T C G C T A A T G C C T G A C T G A A G T C A G T C G T C A G T A C G C T A A G T C A T C G C A G T G T A C G T A C A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCHCAACBACHCGDCC
GCCACACCCA-------
 A C G T A G T C A G T C G C T A A T G C C T G A C T G A A G T C A G T C G T C A G T A C G C T A A G T C A T C G C A G T G T A C G T A C
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SP3/MA0746.1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCHCAACBACHCGDCC
GCCACGCCCCC------
 A C G T A G T C A G T C G C T A A T G C C T G A C T G A A G T C A G T C G T C A G T A C G C T A A G T C A T C G C A G T G T A C G T A C
T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCHCAACBACHCGDCC
GCCCCACCCA-------
 A C G T A G T C A G T C G C T A A T G C C T G A C T G A A G T C A G T C G T C A G T A C G C T A A G T C A T C G C A G T G T A C G T A C
T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CCHCAACBACHCGDCC
AAACCACAGC---------
 A C G T A C G T A C G T A G T C A G T C G C T A A T G C C T G A C T G A A G T C A G T C G T C A G T A C G C T A A G T C A T C G C A G T G T A C G T A C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SP8/MA0747.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CCHCAACBACHCGDCC
GCCACGCCCACT-----
 A C G T A G T C A G T C G C T A A T G C C T G A C T G A A G T C A G T C G T C A G T A C G C T A A G T C A T C G C A G T G T A C G T A C
T C A G G T A C G T A C G T C A G T A C A C T G T A G C T A G C A G T C T G C A A G T C G A C T A C G T A C G T A C G T A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CCHCAACBACHCGDCC
CCCCTCCCCCAC----
 A G T C A G T C G C T A A T G C C T G A C T G A A G T C A G T C G T C A G T A C G C T A A G T C A T C G C A G T G T A C G T A C
T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CCHCAACBACHCGDCC
AAACCACAGAN--------
 A C G T A C G T A C G T A G T C A G T C G C T A A T G C C T G A C T G A A G T C A G T C G T C A G T A C G C T A A G T C A T C G C A G T G T A C G T A C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CCHCAACBACHCGDCC
NWAACCACADNN--------
 A C G T A C G T A C G T A C G T A G T C A G T C G C T A A T G C C T G A C T G A A G T C A G T C G T C A G T A C G C T A A G T C A T C G C A G T G T A C G T A C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T