Information for 4-MMARKRTAWTAAC (Motif 8)

G T C A G T C A G T C A C T A G A C G T C T A G A C G T C G T A C G A T A C G T C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C G T C A A G T C A C G T A C G T A C G T
p-value:1e-8
log p-value:-1.853e+01
Information Content per bp:1.823
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif17.65%
Number of Background Sequences with motif11.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.3 +/- 11.1bp
Average Position of motif in Background57.3 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0121.1_Obox1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-MMARKRTAWTAAC---
TTAAGGGGATTAACTAC
 A C G T G T C A G T C A G T C A C T A G A C G T C T A G A C G T C G T A C G A T A C G T C G T A C G T A A G T C A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PH0053.1_Hoxa6/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:MMARKRTAWTAAC-----
--AAGGTAATTACCTAAT
 G T C A G T C A G T C A C T A G A C G T C T A G A C G T C G T A C G A T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T

PH0072.1_Hoxc8/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:MMARKRTAWTAAC-----
--ACNNTAATTACNNCAN
 G T C A G T C A G T C A C T A G A C G T C T A G A C G T C G T A C G A T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G T A C C T A G C A G T G A C T G T C A G C T A C A G T C A G T C T G A G T A C A G T C G A T C G T A C C G T A T G C A

PB0135.1_Hoxa3_2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:MMARKRTAWTAAC-
AAAAACCATTAAGG
 G T C A G T C A G T C A C T A G A C G T C T A G A C G T C G T A C G A T A C G T C G T A C G T A A G T C A C G T
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

PB0109.1_Bbx_2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:MMARKRTAWTAAC-----
-NNNNCTGTTAACNNTNN
 G T C A G T C A G T C A C T A G A C G T C T A G A C G T C G T A C G A T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:MMARKRTAWTAAC------
----AAAAATAACAAACGG
 G T C A G T C A G T C A C T A G A C G T C T A G A C G T C G T A C G A T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PH0123.1_Obox3/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-MMARKRTAWTAAC---
TGAGGGGGATTAACTAT
 A C G T G T C A G T C A G T C A C T A G A C G T C T A G A C G T C G T A C G A T A C G T C G T A C G T A A G T C A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

PH0022.1_Dlx3/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:MMARKRTAWTAAC----
TCGCGATAATTACCGAC
 G T C A G T C A G T C A C T A G A C G T C T A G A C G T C G T A C G A T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C

Arid3b/MA0601.1/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:MMARKRTAWTAAC---
-----ATATTAATTAA
 G T C A G T C A G T C A C T A G A C G T C T A G A C G T C G T A C G A T A C G T C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

EVX1/MA0887.1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:MMARKRTAWTAAC-
----GNTAATTANN
 G T C A G T C A G T C A C T A G A C G T C T A G A C G T C G T A C G A T A C G T C G T A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C