Information for 4-TTTAGAAAANANRTAG (Motif 6)

G C A T G A C T C G A T C G T A A C T G C G T A C G T A G T C A C G T A A G C T G C T A A C G T T C A G A C G T C G T A A C T G
Reverse Opposite:
G T A C C G A T C G T A A G T C G T C A C A G T C T G A A C G T A C G T C G A T A C G T T A G C A C G T C G T A C T G A C G T A
p-value:1e-8
log p-value:-2.026e+01
Information Content per bp:1.684
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif35.29%
Number of Background Sequences with motif334.8
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets57.7 +/- 11.0bp
Average Position of motif in Background49.8 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIL3/MA0025.1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTTAGAAAANANRTAG
ANGTTACATAA-------
 A C G T A C G T G C A T G A C T C G A T C G T A A C T G C G T A C G T A G T C A C G T A A G C T G C T A A C G T T C A G A C G T C G T A A C T G
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTTAGAAAANANRTAG
VTTRCATAAY------
 G C A T G A C T C G A T C G T A A C T G C G T A C G T A G T C A C G T A A G C T G C T A A C G T T C A G A C G T C G T A A C T G
T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TTTAGAAAANANRTAG
CCGTATTATAAACAA-----
 A C G T A C G T A C G T A C G T G C A T G A C T C G A T C G T A A C T G C G T A C G T A G T C A C G T A A G C T G C T A A C G T T C A G A C G T C G T A A C T G
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T

HLF/MA0043.2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTTAGAAAANANRTAG
CATTACGTAACC-----
 A C G T G C A T G A C T C G A T C G T A A C T G C G T A C G T A G T C A C G T A A G C T G C T A A C G T T C A G A C G T C G T A A C T G
G A T C T C G A G C A T A C G T C T G A A G T C T C A G G A C T G T C A C G T A A G T C G T A C A C G T A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTTAGAAAANANRTAG
CTACCAATAAAATTCT---
 A C G T A C G T A C G T G C A T G A C T C G A T C G T A A C T G C G T A C G T A G T C A C G T A A G C T G C T A A C G T T C A G A C G T C G T A A C T G
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTTAGAAAANANRTAG
-GTATAAAAGGCGGGG
 G C A T G A C T C G A T C G T A A C T G C G T A C G T A G T C A C G T A A G C T G C T A A C G T T C A G A C G T C G T A A C T G
A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTTAGAAAANANRTAG
-GTATAAAAGGCGGGG
 G C A T G A C T C G A T C G T A A C T G C G T A C G T A G T C A C G T A A G C T G C T A A C G T T C A G A C G T C G T A A C T G
A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

ONECUT3/MA0757.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TTTAGAAAANANRTAG-
---AAAAAATCAATAAT
 G C A T G A C T C G A T C G T A A C T G C G T A C G T A G T C A C G T A A G C T G C T A A C G T T C A G A C G T C G T A A C T G A C G T
A C G T A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

PB0080.1_Tbp_1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TTTAGAAAANANRTAG
TCTTTATATATAAATA----
 A C G T A C G T A C G T A C G T G C A T G A C T C G A T C G T A A C T G C G T A C G T A G T C A C G T A A G C T G C T A A C G T T C A G A C G T C G T A A C T G
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A A C G T A C G T A C G T A C G T

ONECUT2/MA0756.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TTTAGAAAANANRTAG-
---AAAAAATCGATAAT
 G C A T G A C T C G A T C G T A A C T G C G T A C G T A G T C A C G T A A G C T G C T A A C G T T C A G A C G T C G T A A C T G A C G T
A C G T A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T