Information for 25-CGGGTGVTCCGGC (Motif 49)

A T G C A C T G C A T G C T A G C A G T A T C G T A C G A C G T A T G C G T A C T A C G C T A G A G T C
Reverse Opposite:
C T A G A G T C A G T C A C T G A T C G G T C A A G T C T A G C G T C A A G T C G T A C T G A C A T C G
p-value:1e-2
log p-value:-6.527e+00
Information Content per bp:1.679
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.0 +/- 0.0bp
Average Position of motif in Background27.1 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CGGGTGVTCCGGC
CGTGGGTGGTCC---
 A C G T A C G T A T G C A C T G C A T G C T A G C A G T A T C G T A C G A C G T A T G C G T A C T A C G C T A G A G T C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGGGTGVTCCGGC-
AAGGKGRCGCAGGCA
 A C G T A T G C A C T G C A T G C T A G C A G T A T C G T A C G A C G T A T G C G T A C T A C G C T A G A G T C A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CGGGTGVTCCGGC
-----GCTCCG--
 A T G C A C T G C A T G C T A G C A G T A T C G T A C G A C G T A T G C G T A C T A C G C T A G A G T C
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

ETV5/MA0765.1/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CGGGTGVTCCGGC
---NACTTCCGGT
 A T G C A C T G C A T G C T A G C A G T A T C G T A C G A C G T A T G C G T A C T A C G C T A G A G T C
A C G T A C G T A C G T G A T C T C G A A G T C C G A T C G A T G T A C G T A C A C T G A T C G G A C T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CGGGTGVTCCGGC-
NNANTGGTGGTCTTNNN
 A C G T A C G T A C G T A T G C A C T G C A T G C T A G C A G T A T C G T A C G A C G T A T G C G T A C T A C G C T A G A G T C A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CGGGTGVTCCGGC
---NRYTTCCGGY
 A T G C A C T G C A T G C T A G C A G T A T C G T A C G A C G T A T G C G T A C T A C G C T A G A G T C
A C G T A C G T A C G T G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T

ETV1/MA0761.1/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CGGGTGVTCCGGC
---NACTTCCGGT
 A T G C A C T G C A T G C T A G C A G T A T C G T A C G A C G T A T G C G T A C T A C G C T A G A G T C
A C G T A C G T A C G T G A C T T C G A A G T C C G A T C G A T G T A C A G T C A C T G A T C G G A C T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CGGGTGVTCCGGC
---HACTTCCGGY
 A T G C A C T G C A T G C T A G C A G T A T C G T A C G A C G T A T G C G T A C T A C G C T A G A G T C
A C G T A C G T A C G T G A T C T C G A A G T C C G A T C G A T A G T C A T G C A C T G A T C G G A C T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CGGGTGVTCCGGC--
-----GGTCTGGCAT
 A T G C A C T G C A T G C T A G C A G T A T C G T A C G A C G T A T G C G T A C T A C G C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

ETV4/MA0764.1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CGGGTGVTCCGGC
---TACTTCCGGT
 A T G C A C T G C A T G C T A G C A G T A T C G T A C G A C G T A T G C G T A C T A C G C T A G A G T C
A C G T A C G T A C G T G A C T T C G A A G T C C G A T G A C T G T A C A T G C A C T G A T C G G A C T