Information for 2-WCTTWAWGGTTCYRAG (Motif 4)

C G T A G A T C A C G T A C G T C G T A C T G A C G A T T A C G A C T G C G A T C G A T A G T C A G C T C T G A G T C A A C T G
Reverse Opposite:
A G T C A C G T A G C T C T G A C T A G G C T A G C T A T A G C A T G C C G T A G A C T C G A T G T C A G T C A C A T G C G A T
p-value:1e-9
log p-value:-2.225e+01
Information Content per bp:1.640
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif29.41%
Number of Background Sequences with motif95.3
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets76.2 +/- 8.7bp
Average Position of motif in Background45.2 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.55
Offset:7
Orientation:forward strand
Alignment:WCTTWAWGGTTCYRAG---
-------NTTTCTNAGAAA
 C G T A G A T C A C G T A C G T C G T A C T G A C G A T T A C G A C T G C G A T C G A T A G T C A G C T C T G A G T C A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.55
Offset:7
Orientation:forward strand
Alignment:WCTTWAWGGTTCYRAG--
-------ATTTCCAAGAA
 C G T A G A T C A C G T A C G T C G T A C T G A C G A T T A C G A C T G C G A T C G A T A G T C A G C T C T G A G T C A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

PB0115.1_Ehf_2/Jaspar

Match Rank:3
Score:0.51
Offset:3
Orientation:forward strand
Alignment:WCTTWAWGGTTCYRAG---
---TAGTATTTCCGATCTT
 C G T A G A T C A C G T A C G T C G T A C T G A C G A T T A C G A C T G C G A T C G A T A G T C A G C T C T G A G T C A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G T A T C A G C A G T C T G A A C G T C G A T C G A T G A T C G A T C A C T G G C T A G C A T T A G C C G A T G C A T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:4
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:WCTTWAWGGTTCYRAG----
-----AGNGTTCTAATGANN
 C G T A G A T C A C G T A C G T C G T A C T G A C G A T T A C G A C T G C G A T C G A T A G T C A G C T C T G A G T C A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

STAT3/MA0144.2/Jaspar

Match Rank:5
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:WCTTWAWGGTTCYRAG---
--------TTTCCCAGAAN
 C G T A G A T C A C G T A C G T C G T A C T G A C G A T T A C G A C T G C G A T C G A T A G T C A G C T C T G A G T C A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:WCTTWAWGGTTCYRAG
ACTTTCACTTTC----
 C G T A G A T C A C G T A C G T C G T A C T G A C G A T T A C G A C T G C G A T C G A T A G T C A G C T C T G A G T C A A C T G
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.49
Offset:7
Orientation:forward strand
Alignment:WCTTWAWGGTTCYRAG-
-------ACATCAAAGG
 C G T A G A T C A C G T A C G T C G T A C T G A C G A T T A C G A C T G C G A T C G A T A G T C A G C T C T G A G T C A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:8
Score:0.48
Offset:9
Orientation:reverse strand
Alignment:WCTTWAWGGTTCYRAG---
---------TTCTNMGGAA
 C G T A G A T C A C G T A C G T C G T A C T G A C G A T T A C G A C T G C G A T C G A T A G T C A G C T C T G A G T C A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.48
Offset:4
Orientation:forward strand
Alignment:WCTTWAWGGTTCYRAG-----
----TATAGATCAAAGGAAAA
 C G T A G A T C A C G T A C G T C G T A C T G A C G A T T A C G A C T G C G A T C G A T A G T C A G C T C T G A G T C A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

TCF7L2/MA0523.1/Jaspar

Match Rank:10
Score:0.48
Offset:5
Orientation:forward strand
Alignment:WCTTWAWGGTTCYRAG---
-----AAAGATCAAAGGAA
 C G T A G A T C A C G T A C G T C G T A C T G A C G A T T A C G A C T G C G A T C G A T A G T C A G C T C T G A G T C A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A