Information for 18-CTCTTCAGAGAGT (Motif 39)

A G T C A C G T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C T G C G T A A C T G
p-value:1e-3
log p-value:-7.913e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTCTTCAGAGAGT---
-NNNACCGAGAGTNNN
 A G T C A C G T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CTCTTCAGAGAGT
NSCACTYVAV-----
 A C G T A C G T A G T C A C G T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A C G T
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTCTTCAGAGAGT
RSCACTYRAG-----
 A C G T A C G T A G T C A C G T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A C G T
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTCTTCAGAGAGT---
-GNNACCGAGAATNNN
 A G T C A C G T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

GFX(?)/Promoter/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTCTTCAGAGAGT
-TCTCGCGAGAAT
 A G T C A C G T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A C G T
A C G T G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTCTTCAGAGAGT
-GCTTCC------
 A G T C A C G T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A C G T
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTCTTCAGAGAGT--
NANTTCATTGAATTA
 A G T C A C G T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A C G T A C G T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CTCTTCAGAGAGT---
-TTGACCGAGAATTCC
 A G T C A C G T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CTCTTCAGAGAGT
CCACTTGAA-----
 A C G T A G T C A C G T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A C G T
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:10
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CTCTTCAGAGAGT-
--TTTCTNAGAAAN
 A G T C A C G T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T