Information for 8-CCTTTTTCGT (Motif 33)

A G T C A G T C A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G C G T A C G T A C G T A C G T A C G T A A C T G A C T G
p-value:1e-3
log p-value:-7.913e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.0 +/- 0.0bp
Average Position of motif in Background81.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0032.1_IRC900814_1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CCTTTTTCGT----
GNNATTTGTCGTAANN
 A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCTTTTTCGT
CCWTTGTY--
 A G T C A G T C A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCTTTTTCGT----
NNTTTTTCTTATNT
 A G T C A G T C A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

PB0137.1_Irf3_2/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTTTTCGT
NNGCACCTTTCTCC-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCTTTTTCGT
CCTTTGTT--
 A G T C A G T C A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCTTTTTCGT
CCTTTGTTTT
 A G T C A G T C A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0075.1_Sp100_1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCTTTTTCGT-----
-ATTTTCCGNNAAAT
 A G T C A G T C A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C G A T C G A T G C A T C A G T G T A C A T G C A T C G C A G T C T G A C G T A G C T A G C T A A G C T

PB0200.1_Zfp187_2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCTTTTTCGT--
GAGCCCTTGTCCCTAA
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCTTTTTCGT
CCTTTGAWGT
 A G T C A G T C A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

HLTF/MA0109.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCTTTTTCGT
AACCTTATAT--
 A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T A C G T