Information for 6-CATATAGACT (Motif 31)

A G T C C G T A A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A G T C A C G T C G T A A C G T C G T A A C G T A C T G
p-value:1e-3
log p-value:-7.913e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 0.0bp
Average Position of motif in Background23.6 +/- 2.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Neurog1/MA0623.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CATATAGACT
ACCATATGGT--
 A C G T A C G T A G T C C G T A A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CATATAGACT
ACATATGG---
 A C G T A G T C C G T A A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T
T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CATATAGACT---
ATGGGATATATCCGCCT
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

Twist2/MA0633.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CATATAGACT
NACATATGGN--
 A C G T A C G T A G T C C G T A A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CATATAGACT
CGTCTAGACA
 A G T C C G T A A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CATATAGACT-
---BCAGACWA
 A G T C C G T A A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

FOXB1/MA0845.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CATATAGACT--
-ATATTTACATA
 A G T C C G T A A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C G T A C G T
A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

NEUROD2/MA0668.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CATATAGACT
ACCATATGGC--
 A C G T A C G T A G T C C G T A A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T A C G T

OLIG3/MA0827.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CATATAGACT
ANCATATGGT--
 A C G T A C G T A G T C C G T A A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T
C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T A C G T

ONECUT1/MA0679.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CATATAGACT----
ANTATCGATTTTTN
 A G T C C G T A A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T